Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0349 ATGGTTTCGACTCAGCATCATGTCCAGGGCCTAACAGCTGAGGAAGAAACAGAACTAGAACCTGTGATACAAAAATACCACCTTTTCGAACACTCTCCCAACAAATGTTTTTCCATAATATCGTACCGCATCGATGCTCCTGCGAGCACGGTTTGGCCGTTCGTGAGAAGCTTCGAGAACCCTCAGAAGTACAAGCACTTCATCAAAGGGTGCAACATGAGGGGTGACGGCGGCGTCGGAAGCATAAGAGAAGTCACGGTGGTTTCAGGTCTTCCGGCGTCGACAAGCACCGAGAGACTCGAGATTTTGGACGATGACAAACACGTTCTGAGCTTTAGGGTTGTTGGTGGCGAGCACCGACTCCAAAACTACCGTTCCGTTACATCGGTGAACGAGTTCAAGAAAGAGGGTACGGTGTACACCATCGTATTGGAATCGTATATCGTAGACATACCCGAAGGGAATACGGAGGAAGATACCAAGATGTTTGTGGACACTGTCGTCAAACTCAACCTTCAGAAACTTGGGGTCGTGGCCATGGCTTCATCGATGCATGAACAATAA 564 0.4876 MVSTQHHVQGLTAEEETELEPVIQKYHLFEHSPNKCFSIISYRIDAPASTVWPFVRSFENPQKYKHFIKGCNMRGDGGVGSIREVTVVSGLPASTSTERLEILDDDKHVLSFRVVGGEHRLQNYRSVTSVNEFKKEGTVYTIVLESYIVDIPEGNTEEDTKMFVDTVVKLNLQKLGVVAMASSMHEQ* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0349 187 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 13 183 - -
Pvu1g0349 187 Gene3D - 2 187 IPR023393 -
Pvu1g0349 187 Pfam Polyketide cyclase / dehydrase and lipid transport 43 175 IPR019587 -
Pvu1g0349 187 SUPERFAMILY Bet v1-like 39 176 - -
Pvu1g0349 187 CDD PYR_PYL_RCAR_like 43 175 - -
Pvu1g0349 187 PANTHER - 13 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0349 Pvu-Chr1 3323917 3324480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0349 K14496 - gmx:100778183 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1174 10 37653248 37657072 Pvu1g0349 1 3323917 3324480 ECH
Pvu1g0349 1 3323917 3324480 Pvu1g0349 1 3323917 3324480 ECH
Pvu1g0349 1 3323917 3324480 Pvu9g0793 9 12628231 12628794 PCT