Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1174 ATGATGAACGGGGATTCTCGCGGTGCTCTTGAGGCACAGTACATAAGGAGGCATCACAGACATGAACCAAGGGAAAACCAGTGCACTTCTGCTCTTGTTAAACACATCAAAGCCCCTGTTCACCTTGTGTGGTCGCTGGTTAGAAGATTTGATCAACCCCAGAAATATAAGCCATTTGTTAGCAGATGTATCATGCAAGGGGACCTTGGCATTGGAAGTGTCAGAGAAGTGAATGTCAAATCTGGGCTTCCAGCCACAACAAGTACTGAGAGGTTGGAACAACTTGATGATGAGGAGCACATTCTTGGCATCAGGATTGTTGGAGGTGACCATAGGCTGAGGAACTATTCTTCCATAATAACAGTTCATCCTGAGGTGATTGAGGGGAGACCTGGAACAATGGTGATTGAATCATTTGTGGTGGATGTGCCTGATGGGAACACCAAGGATGAAACTTGTTACTTTGTGGAGGCTTTGATCAGGTGCAACCTAAGCTCTCTGGCTGATGTCTCAGAGAGGATGGCAGTCCAAGGCCGAACCGATCCCATCAACCATTAA 558 0.4677 MMNGDSRGALEAQYIRRHHRHEPRENQCTSALVKHIKAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIEGRPGTMVIESFVVDVPDGNTKDETCYFVEALIRCNLSSLADVSERMAVQGRTDPINH* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1174 185 CDD PYR_PYL_RCAR_like 28 172 - -
Pvu10g1174 185 PANTHER - 6 182 - -
Pvu10g1174 185 SUPERFAMILY Bet v1-like 28 169 - -
Pvu10g1174 185 Gene3D - 3 181 IPR023393 -
Pvu10g1174 185 Pfam Polyketide cyclase / dehydrase and lipid transport 33 172 IPR019587 -
Pvu10g1174 185 PANTHER ABSCISIC ACID RECEPTOR PYL3-LIKE 6 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1174 Pvu-Chr10 37653248 37657072 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1174 K14496 - gmx:100500065 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1174 10 37653248 37657072 Pvu1g0349 1 3323917 3324480 ECH
Pvu10g1174 10 37653248 37657072 Pvu10g1174 10 37653248 37657072 ECH