Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1389 ATGTCGGCAACCGCTTCTTCTACTTCACTCTGCGCCACTTCCAGAACCTTCTCCGCTAAGCCCGTCCTCGCCAGAACCTTCGTCGCGCTTCCCAAACGCGCGTTCTCCAAGCTCGCCTTCCAATTCAGGCCGCTCTCCATGGCTGCGCTCGGTGTTCGCAATGTGGCCACTCCCGCCGTGGTCCCGCTGCCCTCGCTCGACTTCGAAACCTCCGTTTTCCAGAAGGAGAAGGTTAACCTCGCCGGACACGACGAGTATATTGTGAAAGGAGGGAGGGACTTGTTCCCTCTGTTGCCGGCTGCTTTCAAGGGGATTAAGCAGATTGGTGTCATCGGGTGGGGTTCGCAGGGACCTGCACAGGCACAGAATTTGCGGGATTCTCTCGCTGATGCGAAGTCTGATATTGTGGTTAAGGTTGGCCTTAGGAAAGGTTCTCGTTCCTTTAATGAGGCTCGTGTGGCTGGTTTTAGTGAGGAGAATGGAACTCTGGGTGACATATGGGAAACCATCTCAGGCAGTGATCTTGTGTTGCTGTTGATTTCTGATTCTGCACAGGCAGATAATTATGAAAAAATATTTTCCTACCTGAAGCCAAATAGCATACTTGGGCTGTCACATGGTTTTCTTCTTGGGCATTTACAATCAATAGGACTTGATTTTCCGAAACACTTCAGTGTAATTGCTGTGTGCCCGAAAGGTATGGGTCCTTCTGTAAGGAGACTGTATGTCCAAGGCAAAGAGATTAATGGGGCTGGAATTAATTCAAGTTTTGCAGTCCACCAGGATGTGGATGGCAGAGCTACTGATGTTGCTCTGGCATGGTCCGTTGCCCTTGGTTCCCCTTTTACATTTGCCACTACATTAGAGATGGAATACAGGAGTGACATCTTTGGAGAGAGAGGCATTTTACTTGGTGCTGTTCATGGTGTTGTGGAATCCTTGTTTAGGAGGTACACTGAGCATGGAATGAATGAAGATTTGGCATACAACAACACTGTTGAGTGCATTACAGGAACTATATCTAGAATCATCTCGACTAAGGGCATGATAGCTGTATACAATGCTTTATCTGAAGATGGAAAAAGGGAATTTGAGAAAGCATATAGTGCTTCATATTATCCCTGCATGGACATTTTGTATGAGTGCTATGAGGATATTGCTGCTGGGAGTGAGATTCGCAGTGTTGTCTTGGCTGGACGTCGCTTTTATGAGAAAGAGGGTCTGCCTGCGTTTCCCATGGGTAAAATTGATCAAACACGGATGTGGAAGGTTGGTGAGCGTGTTCGATCTACAAGGCCAGCAGGTGATCTAGGCCCATTATATCCATTCACTGCCGGTGTCTATGTGGCATTGATGATGGCGCAGATTGAGATCCTGAGGAAGAAGGGACATTCTTACTCTGAAATCATTAACGAGAGTGTCATTGAGTCTGTTGATTCTTTGAATCCTTTCATGCATGCTCGCGGTGTTTCTTTCATGGTTGACAACTGTTCAACCACAGCAAGGTTGGGTTCAAGGAAATGGGCTCCGCGATTTGATTACATCCTAACCCAGCAGGCCTTGGTGGCTGTGGACAATGGAGCACCTATCAACCAAGACCTAATCAGCAACTTCCTGTCAGACCAAGTGCATGGAGCCATTGAAGTTTGTGCCCAATTGAGACCTACAGTGGACATTTCAGTGCCACCAGATGCAGACTTTGTCCGCCCTGAGTTGCGTCAGTCTACCAATTAG 1734 0.4781 MSATASSTSLCATSRTFSAKPVLARTFVALPKRAFSKLAFQFRPLSMAALGVRNVATPAVVPLPSLDFETSVFQKEKVNLAGHDEYIVKGGRDLFPLLPAAFKGIKQIGVIGWGSQGPAQAQNLRDSLADAKSDIVVKVGLRKGSRSFNEARVAGFSEENGTLGDIWETISGSDLVLLLISDSAQADNYEKIFSYLKPNSILGLSHGFLLGHLQSIGLDFPKHFSVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALAWSVALGSPFTFATTLEMEYRSDIFGERGILLGAVHGVVESLFRRYTEHGMNEDLAYNNTVECITGTISRIISTKGMIAVYNALSEDGKREFEKAYSASYYPCMDILYECYEDIAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDNGAPINQDLISNFLSDQVHGAIEVCAQLRPTVDISVPPDADFVRPELRQSTN* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1389 577 PANTHER KETOL-ACID REDUCTOISOMERASE 47 576 - -
Pvu11g1389 577 Gene3D - 282 555 IPR013328 GO:0016491
Pvu11g1389 577 Pfam Acetohydroxy acid isomeroreductase, catalytic domain 289 433 IPR000506 GO:0004455|GO:0009082
Pvu11g1389 577 Pfam Acetohydroxy acid isomeroreductase, catalytic domain 446 515 IPR000506 GO:0004455|GO:0009082
Pvu11g1389 577 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 66 284 IPR036291 -
Pvu11g1389 577 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 289 574 IPR008927 -
Pvu11g1389 577 Gene3D - 54 281 - -
Pvu11g1389 577 ProSiteProfiles KARI N-terminal domain profile. 88 286 IPR013116 -
Pvu11g1389 577 ProSiteProfiles KARI C-terminal domain profile. 436 572 IPR000506 GO:0004455|GO:0009082
Pvu11g1389 577 PANTHER KETOL-ACID REDUCTOISOMERASE, MITOCHONDRIAL 47 576 IPR013023 GO:0009082|GO:0016491
Pvu11g1389 577 Pfam Acetohydroxy acid isomeroreductase, NADPH-binding domain 106 280 IPR013116 -
Pvu11g1389 577 ProSiteProfiles KARI C-terminal domain profile. 287 435 IPR000506 GO:0004455|GO:0009082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1389 Pvu-Chr11 30603878 30608428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1389 K00053 - gmx:100789879 1035.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1389 11 30603878 30608428 Pvu11g1389 11 30603878 30608428 ECH
Pvu5g0992 5 28628188 28632208 Pvu11g1389 11 30603878 30608428 PCT