Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu11g1068 | AGATACATGGCTTCTGGGCAAGACACCATTGTGCTGGCGGGAGCTGAATATGGCAGTGGAAGTTCTAGAGATTGGGCTGCCAAGGGTCCAATGCTACTGGGAGTCAAAGCTGTGATAGCTAAAAGTTTTGAGAGAATTCATCGCAGTAATTTGGTAGGAATGGGTATTATTCCTCTTTGCTTCAAATCCGGTGAGGATGCAGACACATTGGGATTAACTGGTCAAGAACGTTATACAATTGACATCCCAAGTAAAATCAGTGATATTAGGCCTGGCCAAGATGTGACAGTCACAACCGATAATGGAAAATCTTTCACCTGCACAGTACGCTTTGACACTGAGGTCGAAATTGCTTACTTCAACCACGGAGGCATACTTCCATATGTCATAAGAAACCTCATCAAGTAG | 408 | 0.4387 | RYMASGQDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGQERYTIDIPSKISDIRPGQDVTVTTDNGKSFTCTVRFDTEVEIAYFNHGGILPYVIRNLIK* | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu11g1068 | 135 | PANTHER | ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER | 1 | 135 | IPR006249 | - | |
| Pvu11g1068 | 135 | Gene3D | Aconitase, domain 4 | 1 | 135 | IPR015928 | - | |
| Pvu11g1068 | 135 | SUPERFAMILY | LeuD/IlvD-like | 2 | 134 | - | - | |
| Pvu11g1068 | 135 | PANTHER | CYTOPLASMIC-LIKE ACONITATE HYDRATASE | 1 | 135 | - | - | |
| Pvu11g1068 | 135 | Pfam | Aconitase C-terminal domain | 1 | 62 | IPR000573 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu11g1068 | Pvu-Chr11 | 11748219 | 11749286 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu11g1068 | K01681 | - | pvu:PHAVU_011G1037000 | 273.478 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pvu5g1190 | 5 | 33284369 | 33293363 | Pvu11g1068 | 11 | 11748219 | 11749286 | PCT |