Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1067 ATGTGTGAAACAACGCCCTCTTCCTCTGCCTCTTCGCTCCTCAGAGCAACCACGCCCAAACTCATCTCTTCCTCACCTTCTAGAACCTTCGCTTTTCCTCCTTCTTTCACTCCCTACTCTTCCCGCAACTCCCTCCGCTCCTCACTCCCGCAGTGGAGCCACCGCCTCCGTCGCGTCTCTCCGCTCACTCTCCGTCGTCCAATCAGAGCCGTCGCTCCCCCCGTCGAACGCTTCCACCGCGAAATCGCTGCCACGGCCAAAGAAAATCCGTTCAAGGGAAACTTGACTAGTCTCCCCAAGCCGGGTGGTGGGGAGTTTGGAAAGTTCTACAGTCTTCCTTCTCTCAATGATCCCAGAATTGACAGGTTACCATACTCCATCAGAATTCTACTTGAATCTGCCATTCGTAATTGTGACAATTTTCAAGTAAAAAAAGAAGATGTAGAGAAGATTCTTGCCTGGGAAATAAACTCTAATAAGCAAGTTGAGATTCCTTTCAAGCCTGCTCGTGTTCTCTTGCAGGATTTTACTGGAGTGCCAGCTGTTGTTGACCTGGCTTGCATGCGCGATGCTATGAATAAGCTTGGCAGTGATTCAAATAAGATCAATCCTTTGGTTCCTGTTGATCTTGTCATTGATCATTCAGTTCAAGTGGATGTTACAAGGTCTGAAAATGCAGTGCAGGCCAATATGGAGCTTGAATTCCAGAGAAACAAGGAGAGATTTGCTTTTCTTAAATGGGGGTCAACTGCATTCCGTAATATGCTTGTTGTTCCTCCTGGTTCTGGTATAGTACATCAGGTCAATCTTGAATATCTTGGAAGGGTTGTATTCAACAATGAGGGCCTACTCTATCCTGACAGTGTGGTTGGGACTGATTCACATACAACTATGATAGACGGGCTTGGTGTTGCTGGATGGGGAGTTGGAGGTATTGAAGCCGAGGCAGCAATGCTTGGTCAGCCTATGAGCATGGTTTTGCCTGGTGTTGTTGGGTTCAAGTTATCTGGAAAACTACGCAACGGTGTTACAGCAACAGACTTAGTTCTAACTGTGACTCAAATTCTCCGAAAACATGGTGTTGTGGGGAAGTTTGTTGAATTTTATGGTGATGGTATGGGTGAATTATCCTTGGCTGATAGGGCCACTATTGCTAATATGTCTCCTGAATATGGTGCCACCATGGGCTTCTTCCCTGTGGATCATGTTACATTGCAATATCTCAAGCTAACTGGAAGGAGTGATGAGACTGTGGCCATGATAGAGTCTTATCTCAGGGAAAACAAACTGTTTGTTGACTATAATGAGCCTCAACAAGAGAGAGTGTATTCATCATATCTTGAATTAAACCTTTCCGATGTGGAACCTTGTATTTCAGGACCAAAGAGACCTCATGATCGGGTGCCTTTGAAAGAAATGAAGGATGACTGGCATGCTTGTCTTGATAACAATGTTGGGTTTAAGGGGTTTGCTATACCAAAAGAAGCACAAGGAAAAGTCGCAAAGTTTAATTTTCATGGCCAGCCAGCGGAGCTCAAGCATGGCAGTGTTGTGATTGCTGCAATCACAAGCTGTACAAATACATCAAATCCTAGTGTTATGCTTGGGGCTGGTCTTGTTGCAAAAAAGGCTCATGAACTTGGTTTGCAGGTCAAGCCTTGGGTTAAAACAAGTCTTGCTCCTGGCTCTGGAGTTGTTACAAAATATCTACACCAAAGTGGACTGCAAAAATATCTAAACGAACAAGGTTTTCATATAGTTGGTTTTGGGTGTACTACATGTATTGGCAATTCAGGAGAGCTGAATGAATCCGTTTCTTCTGCCATCTCTGAGAATGACATTGTAGCAGCTGCTGTATTGTCTGGGAACCGTAATTTTGAAGGCCGAGTACATCCATTGACAAGGGCTAACTACCTTGCCTCTCCTCCTCTTGTTGTTGCTTATGCACTTGCTGGCACGGTTGACATTGATTTTGAGAATGAGCCAATTGGGACAAGCAAGGATGGAAAGAATGTGTACTTACGAGATATCTGGCCATCTACCGAAGAAATTGCTGAGGCTGTCCAATCCAGTGTGTTGCCTGACATGTTTCGAAGTACATACGAGGCTGTTACCAAAGGGAACCCCATGTGGAATCAACTAAAAGTTCCTGCTGACACTCTCTACTCATGGGACCCCAACTCAACATATATCCATGAACCTCCATACTTCAAGAACATGACCATGGATCCTCCAGGACCTCATGGTGTAAAAGATGCTTATTGCCTACTGAATTTTGGTGACAGTATAACCACTGATCATATTTCTCCTGCTGGAAGCATTCACAAGGATAGTCCTGCTGCTAAATACCTTCTTGAGCGCGGGGTGGAACGCAAGGATTTTAATTCTTATGGAAGCCGTCGTGGCAATGATGAAGTGATGGCAAGGGGAACTTTTGCCAACATTCGCCTTGTTAACAAGCTCTTGAATGGGGAAGTTGGCCCAAAGACAATTCACGTTCCAACCGGGGAGAAGCTCTCTGTGTTCGAGGCAGCAATG 2538 0.4523 MCETTPSSSASSLLRATTPKLISSSPSRTFAFPPSFTPYSSRNSLRSSLPQWSHRLRRVSPLTLRRPIRAVAPPVERFHREIAATAKENPFKGNLTSLPKPGGGEFGKFYSLPSLNDPRIDRLPYSIRILLESAIRNCDNFQVKKEDVEKILAWEINSNKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVQANMELEFQRNKERFAFLKWGSTAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIESYLRENKLFVDYNEPQQERVYSSYLELNLSDVEPCISGPKRPHDRVPLKEMKDDWHACLDNNVGFKGFAIPKEAQGKVAKFNFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHELGLQVKPWVKTSLAPGSGVVTKYLHQSGLQKYLNEQGFHIVGFGCTTCIGNSGELNESVSSAISENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFENEPIGTSKDGKNVYLRDIWPSTEEIAEAVQSSVLPDMFRSTYEAVTKGNPMWNQLKVPADTLYSWDPNSTYIHEPPYFKNMTMDPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVERKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTIHVPTGEKLSVFEAAM 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1067 846 TIGRFAM aconitase_1: aconitate hydratase 1 107 846 IPR006249 -
Pvu11g1067 846 Pfam Aconitase family (aconitate hydratase) 149 652 IPR001030 -
Pvu11g1067 846 Gene3D - 681 742 - -
Pvu11g1067 846 Gene3D Aconitase, domain 3 457 680 IPR015931 -
Pvu11g1067 846 Pfam Aconitase C-terminal domain 781 846 IPR000573 -
Pvu11g1067 846 Gene3D Aconitase, domain 3 88 456 IPR015931 -
Pvu11g1067 846 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 55 845 IPR006249 -
Pvu11g1067 846 ProSitePatterns Aconitase family signature 1. 517 533 IPR018136 -
Pvu11g1067 846 Gene3D Aconitase, domain 4 745 846 IPR015928 -
Pvu11g1067 846 SUPERFAMILY LeuD/IlvD-like 721 846 - -
Pvu11g1067 846 PRINTS Aconitase family signature 231 244 IPR001030 -
Pvu11g1067 846 PRINTS Aconitase family signature 255 263 IPR001030 -
Pvu11g1067 846 PRINTS Aconitase family signature 284 297 IPR001030 -
Pvu11g1067 846 PRINTS Aconitase family signature 298 313 IPR001030 -
Pvu11g1067 846 PRINTS Aconitase family signature 360 373 IPR001030 -
Pvu11g1067 846 PRINTS Aconitase family signature 374 387 IPR001030 -
Pvu11g1067 846 PRINTS Aconitase family signature 456 470 IPR001030 -
Pvu11g1067 846 PRINTS Aconitase family signature 521 532 IPR001030 -
Pvu11g1067 846 PRINTS Aconitase family signature 583 596 IPR001030 -
Pvu11g1067 846 ProSitePatterns Aconitase family signature 2. 583 596 IPR018136 -
Pvu11g1067 846 PANTHER ACONITATE HYDRATASE 55 845 - -
Pvu11g1067 846 CDD AcnA_IRP 170 654 - -
Pvu11g1067 846 SUPERFAMILY Aconitase iron-sulfur domain 103 717 IPR036008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1067 Pvu-Chr11 11735797 11747231 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1067 K01681 - gmx:100778506 1546.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1067 11 11735797 11747231 Pvu11g1067 11 11735797 11747231 ECH
Pvu11g1067 11 11735797 11747231 Pvu5g1190 5 33284369 33293363 PCT