Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1047 AAGGTTATATGGGAGAACAAGGAAGGTCTTGAAGATGGATTGTCACATTTGATATACATATCTAGAGAGAAAAGGCCAAATCAGTCACATCATTTCAAAGCTGGTGCAATGAATGTGTTGACAAGAGTCTCTGGATTGATGACCAATGCTCCATTTATCTTGAACGTTGACTGTGACATGATTGTAAACAATCCAAAGGTTCTTCTGCATGCGTTATGCATTTTGCTTGATTCCAAAGGAGAAAAAGAAGTTGCATTTGCTCAATTTCCCCAACAATTCTATGCTACATTGAAGGATGATCCTTTTGGAAATCAGATGACAATTTTTATTAAGTACTTGACTGCTGGAATAGCTGGATTACAAGGACCTTTCTACGGTGGAACAAATTGCTTACTTAGAAGAAAAGTTATCTATGGCAATCTTCCCAATAGAATGGAAAATGGAAACAATTTATCAAAGGATGAACTAGAACAAAAGTTTGGAGATTCAAAGGAGATTATGAAAACAGCTACTCATGCTTTGGAGGGGAAGACATATTTGCCTAATGATATTAATATTTCGATCGCAGTTGACATTGCAGCACAAGTTGCAAGTTGTGGATATGAACATGGTACTAGCTGGGGCAAACAGGTGGGTTGGATATATGGATCAATAACAGAGGATAAACTCCTTGGACTGAAAATACATGAAAAGGGTTGGAGATCAGAATTGTGTACACCAAACCCAATTGCCTTCACAGGTTTTGCTCCAGGAGGTGGCCCAAATGCAATGGCCCAACAAAAGAGATGGGCCATAGGATTGCTTGAGATCTTCTTTAGCAAGCACTGTCCTATTTTTGGCACCATTTTCCATAAGCTTACTTTGAGACAATGCTTAGCATATATGTGGATTATCAACTATTGGGGCCTTAAGCCACTCTTTGAAGTATGCTATGCATGTCTCCTTTCTCATTCAATCATCACCAATTCCACTTTCTTGCCCATGGTACTACCATTTTGTTGTTGCAATTGA 1011 0.3867 KVIWENKEGLEDGLSHLIYISREKRPNQSHHFKAGAMNVLTRVSGLMTNAPFILNVDCDMIVNNPKVLLHALCILLDSKGEKEVAFAQFPQQFYATLKDDPFGNQMTIFIKYLTAGIAGLQGPFYGGTNCLLRRKVIYGNLPNRMENGNNLSKDELEQKFGDSKEIMKTATHALEGKTYLPNDINISIAVDIAAQVASCGYEHGTSWGKQVGWIYGSITEDKLLGLKIHEKGWRSELCTPNPIAFTGFAPGGGPNAMAQQKRWAIGLLEIFFSKHCPIFGTIFHKLTLRQCLAYMWIINYWGLKPLFEVCYACLLSHSIITNSTFLPMVLPFCCCN* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1047 336 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 4 140 IPR029044 -
Pvu11g1047 336 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 329 - -
Pvu11g1047 336 SUPERFAMILY Nucleotide-diphospho-sugar transferases 15 297 IPR029044 -
Pvu11g1047 336 Pfam Cellulose synthase 13 147 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu11g1047 336 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1047 Pvu-Chr11 11071204 11076931 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1047 1 327 Glycosyltransferase AT2G32530 44.118 4.24e-95 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1047 - - pvu:PHAVU_011G101700g 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1047 11 11071204 11076931 Pvu11g1047 11 11071204 11076931 ECH
Pvu5g1203 5 33611340 33613752 Pvu11g1047 11 11071204 11076931 PCT