Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0976 ATGACCGAGGTGCTTCATTTCTCTTCTTCTTCGTCGCCAACCGCTTCTTCCTCTGACGGCATTCTGATTGTCTCCGCCGAGCAAGAACCGGCGCCACCCTCATCTGCGGTGGCGGAGGGGTTTGCTACGGTCACCGACTGTGACGCGCGCGGGGTCACAGACAGGACGCAACAGGAGCTGTCGCTGCTGGCCATTCTTGTGACCCTTTTGAGGAAATCTTTGATTGCTTGCAAGAGTGAGGGGAGAGGTGAACTCTGCGCCATGGAGATTGGCTGGCCCACTAACGTGCGCCACGTTGCGCATGTCACCTTCGACAGGTTCAATGGCTTCTTGGGCTTGCCACGTGAGTTCGAACCAGAAGTCTCCACAAGGTCTCCCAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTATCATATGACACCAGAGGGAACAGTGTTCCAACCATACTTTTACTAATGCAAAGGCACTTGTATGCTCTCGGAGGGTTGCAGGCAGAGGGAATTTTCAGAATTAATGCAGACAATACTCAAGAGGAGAATGTTAGGAATCAATTAAACAGGGGATTGGTCCCAGAAGATGTTGATATACATTGTTTAGCTGGACTAATTAAGGCTTGGTTTAGGGAGCTTCCTACTGGTGTTCTGGATTCTTTGTCACCAGAGCATGTAATGCAATGCCAGACTGAAGATGATTGTGCTGAACTAGTGAGGCAGCTACCTCAAACCGAAGCTTCCCTCTTGGACTGGGCTATCAATCTGATGGCTGATGTTGTCCAAGAGGAACGCCTTAATAAGATGAATGCACGCAACATCGCCATGGTTTTTGCCCCAAACATGACTCATATGGCAGACCCTTTGATTGCATTGATGTATGCAGTTCAAGTTATGAACTTCCTGAAAACACTTGTGTTAAGGACACTACGAGAAAGAAAGGATTGTGTGGTAGAATCGTCTCCTGGGTTTTGTCTAGAGCCTTCTGATGAGAATGGGGATCACAGTCTTTTGGAGTCCTGTCAACAAGATGATGTTTCCACTGAAAGTGAAGGATCTGGGGAAACCTTTGTTTCTGAGAAAACTGTGTTAGAATGTTCCCCTGATTCTCTCCAAAACAATTATTCAACTGAAGGAGAATGTGGCAGTTTGATAGGCTCTTCTGAGAATCTGGATTTTGAGGAGGAATTACATTGTGAGTTTCCAACCAAAGGAAACATTGGGAAGAGTAAGAGTGGACAATCAAGTAATTCCAGTGCTAAAAAGGGGTCCAAGAAAACCAGAGGCCTGCAACCTGTGATCCATGCAACAGTGGCTGCTGAGAAAAAGGGCATCAGCAATCTGAGCCGCATAGATTCAAGATCAGAGAGAATAGAAGCCTGGCGGTGA 1395 0.471 MTEVLHFSSSSSPTASSSDGILIVSAEQEPAPPSSAVAEGFATVTDCDARGVTDRTQQELSLLAILVTLLRKSLIACKSEGRGELCAMEIGWPTNVRHVAHVTFDRFNGFLGLPREFEPEVSTRSPSASATVFGVSTESMQLSYDTRGNSVPTILLLMQRHLYALGGLQAEGIFRINADNTQEENVRNQLNRGLVPEDVDIHCLAGLIKAWFRELPTGVLDSLSPEHVMQCQTEDDCAELVRQLPQTEASLLDWAINLMADVVQEERLNKMNARNIAMVFAPNMTHMADPLIALMYAVQVMNFLKTLVLRTLRERKDCVVESSPGFCLEPSDENGDHSLLESCQQDDVSTESEGSGETFVSEKTVLECSPDSLQNNYSTEGECGSLIGSSENLDFEEELHCEFPTKGNIGKSKSGQSSNSSAKKGSKKTRGLQPVIHATVAAEKKGISNLSRIDSRSERIEAWR* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0976 464 MobiDBLite consensus disorder prediction 409 427 - -
Pvu11g0976 464 CDD RhoGAP 152 307 - -
Pvu11g0976 464 CDD CRIB 88 128 - -
Pvu11g0976 464 MobiDBLite consensus disorder prediction 404 436 - -
Pvu11g0976 464 SUPERFAMILY GTPase activation domain, GAP 130 308 IPR008936 GO:0007165
Pvu11g0976 464 Gene3D Rho GTPase activation protein 120 320 IPR008936 GO:0007165
Pvu11g0976 464 Pfam P21-Rho-binding domain 89 116 IPR000095 -
Pvu11g0976 464 Gene3D CRIB domain 86 119 IPR036936 -
Pvu11g0976 464 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 1 464 - -
Pvu11g0976 464 Pfam RhoGAP domain 152 286 IPR000198 GO:0007165
Pvu11g0976 464 ProSiteProfiles CRIB domain profile. 90 103 IPR000095 -
Pvu11g0976 464 ProSiteProfiles Rho GTPase-activating proteins domain profile. 135 320 IPR000198 GO:0007165
Pvu11g0976 464 SMART RhoGAP_3 149 309 IPR000198 GO:0007165
Pvu11g0976 464 SMART PBD_5 90 124 IPR000095 -
Pvu11g0976 464 PANTHER MKIAA1688 PROTEIN 1 464 IPR044785 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0976 Pvu-Chr11 9710626 9714481 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0976 - K20642 gmx:100784019 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0976 11 9710626 9714481 Pvu11g0976 11 9710626 9714481 ECH
Pvu5g1275 5 34712217 34716147 Pvu11g0976 11 9710626 9714481 PCT