Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0950 ATGGAGTTGGGGAGCGTACTGCACTTTCTTCAGGACAAGACCATTTTGATCACTGGAGCCACTGGCTTTCTTGCCAAAGTTTTATTGGAGAAGATACTGAGGGTCCAACCAAATGTTAAGAAGCTCTACCTTCTCTTAAGAGCTGCAGACGCCAAATCTGCTACTCATCGCTTGCACAATGAGATCATAGCGAAGGATCTGTTTAGGGTATTAAAGGAAAAAATGGGTGCAAATTTTAACTCTCTTATCTTGGAAAAGTTGACTCTGGTGCCTGGGGACATTTCTCGTGAAGATTTAGGATTGGAGGATACCATTCTAAGGGAAGAAATTTATGATCAAACAGACGTCATCATTAATTTAGCTGCAACAACAAACTTTGACGAAAGGTATGATATATCTTTGGGTCTAAATACCTTTGGTGTTAAGTATGTCATCAACTTCGCCAAAAAGTGTACTAAACTTGAGGTTCTTGTGCATGTATCAACAGCCTATGTAAGTGGTGAGGGAGGAGAGGAAGGACTGATATTAGAGAAACCGTATCATTTGGGTGATTCTCTGAATGGAGTTTCTGGATTAGACATTAATGCAGAAGACAAGTTGGTTCGTGAAAAACTGACCGAGTTACAACAACTGGGGGCCACAGAAAAGGAAATTAAAGAGGTTATGAAGGACTTGGGTCTTAGCAGGGCAAAGTTGTATGGATGGCCAAACACATATGTATTCACCAAGGCCATGGGAGAGATGCTTGTGGAGCAACTAAAGGGAAACTTATCTGTTGTCATCATTCGTCCTACTATTGTTACCAGCACATTCAAAGAACCTTTCCCTGGTTGGGCTGAAGGTGTAAGAACCATTGACAGTTTAGCTGTAGCTTATGGGAAAGGAAAATTAACATGCTTCCTTGGAGATCTCAAAGCAATTGTTGATGCGATACCAGCTGACATGGTGGTGAATGCAATACTTGTGGCTATGGCGGCTCATGCAAATCGTCCTACCGATGATGTTATATATCATGTTGGTTCCTCTGTTAGAAAACCACTGAGATACAACAATCTTCAAGATTATGGCTTCAGATATTTCACAGCAAAACCATGGATAAACAAGGATGGAAGTCCAGTTAAGGTTGACAAAGTTACAGTATTGAACAACATGGACAGCTTCAGAAGATATATGTTTCGCTACCTGCTTGTGCTGAAGGGACTTGAGATAGCCAATACTGCATTTTGCCAGTATTTCCAAGGAACATATCTTAATCTCAATAGGAAGGTTCAGATCGTGATGCGGTTGGTGGACCTTTACAAGCCCTACTTGTTCTTCAGAGCTGCGTTTGATGATATGAACACAGAGAAATTGCGAATGGCAGCAAGACAAGGAGGGGTGGAGACAGATTTGTTTTACTTTGATCCACAACACATAGAATGGGATGATTACTTTTTGAACATCCACCTTCCTGGTGTGGTTAAGTACATTTTCAAGTGA 1479 0.4118 MELGSVLHFLQDKTILITGATGFLAKVLLEKILRVQPNVKKLYLLLRAADAKSATHRLHNEIIAKDLFRVLKEKMGANFNSLILEKLTLVPGDISREDLGLEDTILREEIYDQTDVIINLAATTNFDERYDISLGLNTFGVKYVINFAKKCTKLEVLVHVSTAYVSGEGGEEGLILEKPYHLGDSLNGVSGLDINAEDKLVREKLTELQQLGATEKEIKEVMKDLGLSRAKLYGWPNTYVFTKAMGEMLVEQLKGNLSVVIIRPTIVTSTFKEPFPGWAEGVRTIDSLAVAYGKGKLTCFLGDLKAIVDAIPADMVVNAILVAMAAHANRPTDDVIYHVGSSVRKPLRYNNLQDYGFRYFTAKPWINKDGSPVKVDKVTVLNNMDSFRRYMFRYLLVLKGLEIANTAFCQYFQGTYLNLNRKVQIVMRLVDLYKPYLFFRAAFDDMNTEKLRMAARQGGVETDLFYFDPQHIEWDDYFLNIHLPGVVKYIFK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0950 492 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 491 IPR026055 GO:0080019
Pvu11g0950 492 Pfam Male sterility protein 17 320 IPR013120 -
Pvu11g0950 492 CDD FAR_C 392 491 IPR033640 -
Pvu11g0950 492 CDD FAR-N_SDR_e 13 364 - -
Pvu11g0950 492 Pfam Male sterility protein 394 492 IPR033640 -
Pvu11g0950 492 Gene3D - 8 387 - -
Pvu11g0950 492 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 338 IPR036291 -
Pvu11g0950 492 PANTHER FATTY ACYL-COA REDUCTASE 2 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0950 Pvu-Chr11 9353023 9358685 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0950 113 491 Acyl Lipid Metabolism Gene Families AT4G33790 60.000 4.13e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0950 K13356 - gmx:100798338 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1296 5 34953368 34959106 Pvu11g0950 11 9353023 9358685 PCT