Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0949 ATGTCTGAGTTCTTCAAGGGAAAGACCATTTTAATGACTGGCACAACAGGCTTCTTAGCAAAAGTTTTCTTGGAAAAGATTCTGAGAACCCAACCCCAAGTACACAAACTGTATCTTCTGGTCCGAGCAAAAACCATTGATTTGGCTGCACAACGCTTCCAAAATGAGGTCATTCGCACATATTTATTTAGAGTGTTACGAGACCAATGGGGCAAAGATTTTGATTCTTTCATTTTAAAGAAGATTGTGGTCATATCAGGAGATGTTTCTCTCCATAATTTTGGTTTGGAAGATGAAAAGCTCAAGATTAAGATGTTTGAAGAGATCAACATTATTATAAATTTTGCAGCAACTACCAAATTTGACGAGAGATTTGACATCTCAATAGATGTAAATACAATGGGTGTCTTACACGTCTTAAACTTCGCAAAGCATTGTCCTGAGATAAAGATTTTTATGCAAATATCAACTGCATACGTGTGTGGAGAGATTAAGGATGAAAAAACAATTGTGCAAGAGAAACCCTTTGAGATGGGTCAGACCTTGAAAAAGTCCTCGAAATTAGACATAACTGAAGAAATGAATTTGTTGAAGAAGAAGATAGATGAACTTCGATCAAAGAATGCTACTGAAAGCACAATAAAAAATGCATTGAAAGATTATGGAATTGAAAGAGCAAATTTGTATGGTTGGCCAAATACATACGCATTCACAAAAGCAATGGGAGAGATGCAATTGGTTCATCATAAAGATAATGTTCCACTAATCATTATACGTCCCACCATGGTTACTAGTACCCTTAAGGACCCATTTCCTGGTTGGATTGAAGGCTTGAGAACTCTCGACAGCATAATATGTAGTTATGGTCAAGGGAAAATAACAAACTTTCTTGGTCATCCCAAGACAATTTTGGATACGGTCTTAAATGTGGTGAACAAAGCGTTTTGTCAATGCTCTCGAGATGTTTATGACGATAGCTACAAAAAATTCAAAAGGGTGACACGACTAGTTGAAGTATACAAACCATACCTGTTTTTTAAGGGCGTCTTTGATGATTCAAACACACAAAATTTACGAAGAGCAACAAGTAATAACATTGAGGTTGCTGCTGGATTGAACTTTGACCCTAATAGCATCAATTGGAAAGACTACATGATGAACACACACATTCCTGGTCTTGTAAAGTATGCGTTGAAATGA 1200 0.365 MSEFFKGKTILMTGTTGFLAKVFLEKILRTQPQVHKLYLLVRAKTIDLAAQRFQNEVIRTYLFRVLRDQWGKDFDSFILKKIVVISGDVSLHNFGLEDEKLKIKMFEEINIIINFAATTKFDERFDISIDVNTMGVLHVLNFAKHCPEIKIFMQISTAYVCGEIKDEKTIVQEKPFEMGQTLKKSSKLDITEEMNLLKKKIDELRSKNATESTIKNALKDYGIERANLYGWPNTYAFTKAMGEMQLVHHKDNVPLIIIRPTMVTSTLKDPFPGWIEGLRTLDSIICSYGQGKITNFLGHPKTILDTVLNVVNKAFCQCSRDVYDDSYKKFKRVTRLVEVYKPYLFFKGVFDDSNTQNLRRATSNNIEVAAGLNFDPNSINWKDYMMNTHIPGLVKYALK* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0949 399 Gene3D - 3 335 - -
Pvu11g0949 399 CDD FAR_C 327 398 IPR033640 -
Pvu11g0949 399 PANTHER FATTY ACYL-COA REDUCTASE 310 396 - -
Pvu11g0949 399 PANTHER FATTY ACYL-COA REDUCTASE 3 307 - -
Pvu11g0949 399 Pfam Male sterility protein 303 399 IPR033640 -
Pvu11g0949 399 Pfam Male sterility protein 13 307 IPR013120 -
Pvu11g0949 399 CDD FAR-N_SDR_e 8 307 - -
Pvu11g0949 399 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 314 IPR036291 -
Pvu11g0949 399 Coils Coil 187 207 - -
Pvu11g0949 399 PANTHER MALE STERILITY PROTEIN 2-RELATED 3 307 IPR026055 GO:0080019
Pvu11g0949 399 PANTHER MALE STERILITY PROTEIN 2-RELATED 310 396 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0949 Pvu-Chr11 9313993 9320104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0949 3 307 Acyl Lipid Metabolism Gene Families AT3G44540 51.961 1.76e-113 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0949 K13356 - tcc:18593326 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1297 5 34970296 34973651 Pvu11g0949 11 9313993 9320104 PCT