Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0872 ATGGCATCAGCACCAACACTTTCCAAAGTTTCTCTCTCTTTTGTGTTGCTTTTCCTTTCACTTTATGCATCTTCTGCAATTTCTCATCGCCTCATCCTTGACCCAAAGGAACCAGTTAACACCATAAAAGGTGACTATGCAGGTTTTGTCCCTGGTAAGATCGTGGAGAAGAAGTTCTCGTTTTTTGGTGATTCTGGGCCTCCTGTTGAAGACCTTGGTCACCATGCAGGCTACTATTCACTTCCTCATTCCAAAGCTGCAAGAATGTTCTACTTTTTCTTTGAATCACGGAAGAGCAGGAATGATCCTGTTGTCATATGGTTGTCTGGAGGACCAGGGTGTGGAAGTGAATTAGCTCTGTTTTATGAAAATGGTCCTTTTCATATTACCAATAACTTGTCTCTTACATGGAATCAATACGGCTGGGATCAGGAATCAAATATTATATTTGTTGACCAACCCACTGGGACAGGTTTTAGTTACTCTTCTGATGACAGTGACGTTCGCAACGATGAAACCGGCGTTAGTATTGATTTATATGATTTCTTGCAGGAGTTTTTCAAGATGCATCCTGATTTCGTTAAGAATGACTTCTACATCTTTGGTGAATCATATGCTGGACACTATGTTCCTGCACTTGCATCCCGGGTTAACCAAGGAAATAAACAAAATCAAGGACTTCATATAAACCTCAAGGGTTTTGCAATCGGTAATGGGTTAACCAATCCTGCAATTCAATACCAAGCATACCCAGATTTTGCATTAGACAACAGAATAATTACAAAGGCTCAGTACGACAACGTCAACGTCTTAATGCCAGACTGTGAACAAGCCACTAAAACTTGTGAAACTCAAGGTGGAAATAGTTGCTTCAGAGCGTTACGTATTTGTGAAGACATTTTCGACCGTATAGTGGACTTTACCGACAACATTAATTACTATGACATCAGAAAGAAATGTGAGGGGAATTTGTGCTACAACTTCACAAACGTGGAGACGTTGCTAAACATGCAGAAAGTGAAGAGTGCTTTAGGTGTCAGTGATGACTTGAAGTATGAGTTATGCAGTGATGCTGTTCATGATGCTATGATGCAAGACTGGATGAGAAACCTGGAAGTGGGGATTCCTGCTCTTCTTGAGGATGGAATCAAGTTGCTCCTTTATGTTGGGGAGGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTTCATGCCATGGAGTGGTCAGGCCAAAAGGCCTTTGGAAAATCTCCTACTGTGAAATTCGTGGTTCATGGTGCAGAAGCAGGTTCTCTTAATAGCTATGGACCCCTCTCTTTCCTCAAGGTACATAAGGCTGGGCACTTGGTCCCTATGGATCAACCAAAAGTTTCACTTGAGATGTTCAAACGTTGGATGGGAGGGAAAATGACCAGACATAAACATGAGAAGATAATTAAACATAAACCAAACACCATGTAA 1467 0.4145 MASAPTLSKVSLSFVLLFLSLYASSAISHRLILDPKEPVNTIKGDYAGFVPGKIVEKKFSFFGDSGPPVEDLGHHAGYYSLPHSKAARMFYFFFESRKSRNDPVVIWLSGGPGCGSELALFYENGPFHITNNLSLTWNQYGWDQESNIIFVDQPTGTGFSYSSDDSDVRNDETGVSIDLYDFLQEFFKMHPDFVKNDFYIFGESYAGHYVPALASRVNQGNKQNQGLHINLKGFAIGNGLTNPAIQYQAYPDFALDNRIITKAQYDNVNVLMPDCEQATKTCETQGGNSCFRALRICEDIFDRIVDFTDNINYYDIRKKCEGNLCYNFTNVETLLNMQKVKSALGVSDDLKYELCSDAVHDAMMQDWMRNLEVGIPALLEDGIKLLLYVGEEDLICNWLGNSRWVHAMEWSGQKAFGKSPTVKFVVHGAEAGSLNSYGPLSFLKVHKAGHLVPMDQPKVSLEMFKRWMGGKMTRHKHEKIIKHKPNTM* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0872 488 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 61 472 - -
Pvu11g0872 488 Pfam Serine carboxypeptidase 71 469 IPR001563 GO:0004185|GO:0006508
Pvu11g0872 488 ProSitePatterns Serine carboxypeptidases, serine active site. 200 207 IPR018202 GO:0004185
Pvu11g0872 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 150 IPR001563 GO:0004185|GO:0006508
Pvu11g0872 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 151 161 IPR001563 GO:0004185|GO:0006508
Pvu11g0872 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 186 211 IPR001563 GO:0004185|GO:0006508
Pvu11g0872 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 453 IPR001563 GO:0004185|GO:0006508
Pvu11g0872 488 SUPERFAMILY alpha/beta-Hydrolases 72 471 IPR029058 -
Pvu11g0872 488 Gene3D alpha/beta hydrolase 58 483 IPR029058 -
Pvu11g0872 488 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 61 472 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0872 Pvu-Chr11 8142889 8145752 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0872 K16298 - gmx:100798795 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0872 11 8142889 8145752 Pvu5g1353 5 35645751 35649690 PCT