Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0870 ATGGCATTGTCATCATCACCATCCCTCTCCAAACTCTCTCTTCTGCTGTTCTTCTTCCTGTCACTTTCTTCTTCTTATGCTACTTTTGACCCCTCTCATCACCCTGCCTACCTGCCACAATCACATGCAGAAAGGCTCATAAGAAGCCTTAACGTATTTCCAAAGGACTCAGTTAACATTACAAAAGGTGACCATGGTGGTTTTGTCCCTGGTATGATCGTGGAGAAGAAGTTCTCGTTTCTTGGTGATTCTGGGCCATCTGTTGAAGACCTTGGTCACCATGCAGGCTATTATTCACTGCCTCATTCCAAAGCTGCCAGGATGTTCTACTTTTTCTTTGAATCACGGAACAGTAAGGATGATCCTGTTGTCATATGGTTGACTGGTGGACCAGGGTGTGGAAGTGAATTAGCTTTGTTTTACGAAAATGGTCCTTTTCATATTACCAATAACTTGTCTCTTACATGGAATCATTATGGCTGGGATCAGGCATCAAATATTATATTTGTTGACCAACCCACTGGGACAGGTTTTAGTTACTCTTCTGATGACAGTGACATTCGCCACGATGAAACCGGTGTTAGCATTGATTTATATGATTTCTTGCAGGAGTTTTTCAAGACGCATCTTGATTTCGTTAAGAATGACTTCTACATCTTTGGTGAATCATATGCTGGACACTATGTTCCTGCACTTGCATCCCGGGTTAACCAAGGAAATAAACAAAATCAAGGACTTCATATAAACCTTAAGGGTTTTGCAATCGGTAATGGGTTAACCAATCCTGCAATTCAATTCCAAGCATACCCAGATTTTGCATTAGACAACAGAATAATTACAAAGGCTCAGTACGACAATGTCACCATGTTAATCCCACACTGTGAACAAGCCATTAAAACTTGCGAAGCTCAAGGTGGAAATAGTTGCATCAGAGCAGTAGATATTTGTGAAAACATTTTCGACCGTATCCTGGACTTTATCGACAACATTAATTACTATGACATCAGAAAGAAATGTGAGGGGGATTTGTGCTACAACTTCACACAAGTGGAGACGTTGTTAAACATGCAGAAGGTGAAGAGTGCTTTGGGTGTGATGGATGACTTGAAGTATGAGTTATGCAGTTTAGAAGTTCGTGTGGCTATGATGCAAGACTGGATGAGAAACCTGGAAGTGGTTATTCCTTCTCTTCTTGAGGATGGAATCAAGTTGCTTGTGTATGTTGGTGAAGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTACAAGCCATGGAGTGGTCAGGCCAAAAGGCCTTTGGGATATCTCCTACAGGGAAATTTGTGGTTGATGGTGCCGAAGCAGGTTCTCTTAATAGCTATGGACCTCTAACTTTTCTCAAGGTGCATGGGGCAGGGCACATGGTCCCTATGGATCAACCAAAAGCTGCACTTCAGATGTTGACAAGCTGGACGGGAGGGAAACTGAATGCATCCTCTTCTCCAAGTTTTTCTCACCAGCTAAGATCAAGACCATTGATCATCTTCTTTATTCTCTTTCTTTATTGTACAATCACCAGTCAAATGCTCAGATCTTGA 1584 0.4192 MALSSSPSLSKLSLLLFFFLSLSSSYATFDPSHHPAYLPQSHAERLIRSLNVFPKDSVNITKGDHGGFVPGMIVEKKFSFLGDSGPSVEDLGHHAGYYSLPHSKAARMFYFFFESRNSKDDPVVIWLTGGPGCGSELALFYENGPFHITNNLSLTWNHYGWDQASNIIFVDQPTGTGFSYSSDDSDIRHDETGVSIDLYDFLQEFFKTHLDFVKNDFYIFGESYAGHYVPALASRVNQGNKQNQGLHINLKGFAIGNGLTNPAIQFQAYPDFALDNRIITKAQYDNVTMLIPHCEQAIKTCEAQGGNSCIRAVDICENIFDRILDFIDNINYYDIRKKCEGDLCYNFTQVETLLNMQKVKSALGVMDDLKYELCSLEVRVAMMQDWMRNLEVVIPSLLEDGIKLLVYVGEEDLICNWLGNSRWVQAMEWSGQKAFGISPTGKFVVDGAEAGSLNSYGPLTFLKVHGAGHMVPMDQPKAALQMLTSWTGGKLNASSSPSFSHQLRSRPLIIFFILFLYCTITSQMLRS* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0870 527 Gene3D alpha/beta hydrolase 75 496 IPR029058 -
Pvu11g0870 527 ProSitePatterns Serine carboxypeptidases, histidine active site. 459 476 IPR033124 GO:0004185
Pvu11g0870 527 Pfam Serine carboxypeptidase 90 488 IPR001563 GO:0004185|GO:0006508
Pvu11g0870 527 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 35 491 - -
Pvu11g0870 527 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Pvu11g0870 527 SUPERFAMILY alpha/beta-Hydrolases 91 490 IPR029058 -
Pvu11g0870 527 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Pvu11g0870 527 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Pvu11g0870 527 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Pvu11g0870 527 PRINTS Carboxypeptidase C serine protease (S10) family signature 459 472 IPR001563 GO:0004185|GO:0006508
Pvu11g0870 527 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 491 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0870 Pvu-Chr11 8129070 8131920 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0870 K16298 - gmx:100798795 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1255 1 34074388 34077675 Pvu11g0870 11 8129070 8131920 ECH
Pvu7g2493 7 48180220 48184082 Pvu11g0870 11 8129070 8131920 ECH
Pvu11g0870 11 8129070 8131920 Pvu11g0870 11 8129070 8131920 ECH
Pvu5g1353 5 35645751 35649690 Pvu11g0870 11 8129070 8131920 PCT