Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0747 ATGTCTTTGATCCTATGTTTCTCACTGAACGTCAAGTTGTCTACACATCACATCTCCAGCAAAACCTCCAAGCTCCACCTGGATGACACGTGTGTCTCTATATTTTCTTCTCACTCCCTTCATAAAGCCACCTCTTTCTTTCATCTTCTACCTCAAATTGCATGTGCCATGGGAAACACGATTACCCTTTTGCTCTTACTCTTAGTTCTTCTCTACCATGGAGCAATGGCCATCCCTGAAGGTAAAGAAGACAGCTTGTTCCTGATGCACAGCCCCAAGAGAGTGGTGAAGACTGATGCAGGGGAAATGCATGTGCTGAAAACCCAAAGTGGTTGTATGAGGTTTTTGGATAGGCACATGCACATTGGCTTCATCACTATGGAACCAAAGTCTTTGTTCGTCCCTCACTACCTTGACACCAATCTCATCATATTCATCCATAAAGGGGAAGCAAATTTGGGATTCATGTATGATGATGAACTAGTGGAAAAGAGATTGAAGACAGGAGACTTGTATGTGATTCCATCAGGTTCAGCATTTTATTTTGTGAACATAGAGGAAGGTCAGAGACTTCACATCATATGCAGCATTGACCCCTCTACAAGCTTGGGATTAGATACCTTCCATTCCTTCTATATTGGGGGAGGAGCCAATTCACACTCACTGCTTTCTGGATTCGGACCTGCTATTCTTGAAGCTGCATTTAATGAAACAAGAATGGAGGTAGAGAGTATCTTTTATAAGGAACTAGATGGGCCAATTATGTACATGGATGATTCTCATGTACCAAGCCTAGGGATTAAATTCCTTCAACTGGAGAAAGAAGAAAAAGAGCAACACCTGAAGAAAATGCTGCTAGACCAAGAAGAAGAAAAAGAAGAGGAGCATCAAACAAGTAGATCATGGAGAAAACCCTTGGAAACTATATTTGGCAAGGTGAATGAGAAGACAGAGAGCAAAAACAGTATTGATTGGAGCGTGGCAAAAAACCTCTATGACAGAAAACCTGATTTCAGAAACGATTATGGTTGGAGCAAGGCACTGGATGGAGGAGAGTATCCTCCACTCACCAAACCTGACATTGGTGTCTTCCATGTCTATCTCACAGCGGGATCCATGTTGGCACCTCATGTGAATCCAAGAGCTTCTGAGTATGCCATAGTGTTGAAGGGCAGTGGTGAGCTTGCTATAGTGTATCCAAATGGAAGCAAAGCAATTAGCACTGAAATCAAAGAAGGGGATGTGTTTGTTGTTCCTAGATACTTCCCCTTCTGTCAAATAGCATCAAAGGATGGACCCTTGGAGTTCTTTGGCTTCTCCACCTCTGCCAGGGAGAACAAGCCACAGTTTCTGGCTGGTTCTGTGTCCCTTCTTAGGACCTTTCAGGGGCCTCAGCTTGCGGCGGCGCTTGGGGTGAGTGAGGACACTTTGCGGCGTGCCCTTGATCCTCGGGATGAGGCTGTGATCCTACCACCACCATAA 1482 0.4447 MSLILCFSLNVKLSTHHISSKTSKLHLDDTCVSIFSSHSLHKATSFFHLLPQIACAMGNTITLLLLLLVLLYHGAMAIPEGKEDSLFLMHSPKRVVKTDAGEMHVLKTQSGCMRFLDRHMHIGFITMEPKSLFVPHYLDTNLIIFIHKGEANLGFMYDDELVEKRLKTGDLYVIPSGSAFYFVNIEEGQRLHIICSIDPSTSLGLDTFHSFYIGGGANSHSLLSGFGPAILEAAFNETRMEVESIFYKELDGPIMYMDDSHVPSLGIKFLQLEKEEKEQHLKKMLLDQEEEKEEEHQTSRSWRKPLETIFGKVNEKTESKNSIDWSVAKNLYDRKPDFRNDYGWSKALDGGEYPPLTKPDIGVFHVYLTAGSMLAPHVNPRASEYAIVLKGSGELAIVYPNGSKAISTEIKEGDVFVVPRYFPFCQIASKDGPLEFFGFSTSARENKPQFLAGSVSLLRTFQGPQLAAALGVSEDTLRRALDPRDEAVILPPP* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0747 493 Gene3D Jelly Rolls 80 268 IPR014710 -
Pvu11g0747 493 Gene3D Jelly Rolls 332 493 IPR014710 -
Pvu11g0747 493 CDD cupin_7S_vicilin-like_C 336 487 - -
Pvu11g0747 493 SUPERFAMILY RmlC-like cupins 85 487 IPR011051 -
Pvu11g0747 493 Coils Coil 267 294 - -
Pvu11g0747 493 Pfam Cupin 91 195 IPR006045 -
Pvu11g0747 493 Pfam Cupin 330 475 IPR006045 -
Pvu11g0747 493 SMART Cupin_1_3 87 243 IPR006045 -
Pvu11g0747 493 SMART Cupin_1_3 329 478 IPR006045 -
Pvu11g0747 493 CDD cupin_7S_vicilin-like_N 95 265 - -
Pvu11g0747 493 PANTHER OS03G0336100 PROTEIN 57 491 - -
Pvu11g0747 493 PANTHER OS03G0336100 PROTEIN-RELATED 57 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0747 Pvu-Chr11 6564143 6567180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0747 95 490 Miscellaneous Gene Families AT2G18540 30.361 6.87e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0747 - - vra:106755871 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1417 5 36545036 36547446 Pvu11g0747 11 6564143 6567180 PCT