Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0731 ATGAATTGTTTTTATTTCTGCATGCAAATTCAGCATCACAGAATTGTTCGACAACCACATTTGTTATTTGTCTCAGCAAATGACAGCAACGCGCAAGAGATAGAGATAGAGAGCCAAAAGCCGAAAACGCCATCATCCAAACAGCCCCTTCTCTCTCTTTTAAAAGACACCCTGTGGTTTTTCTCTGCCCTCTTAACTTTTTGCCCTCTCTCTCTCCTCTTATCGATTTCACAGACAATCTCCTCCTCACAGTTTCGTCTTCTCGATCTCACTGCAATCATGAGTGACAAAGGAGAAAGAACATGTCCTCTCTGTGCTGAAGAAATGGATTTGACAGATCAGCAGTTGAAGCCTTGCAAATGTGGTTACGAGATCTGTGTCTGGTGCTGGCATCACATAATGGACATGGCTGAGAAGGATGACACTGACGGGCGATGCCCCGCATGTCGTTCTCCTTATGATAAGGAAAAGATTGTTGGGATGGCTGCAAACTGTGAGAG 500 0.444 MNCFYFCMQIQHHRIVRQPHLLFVSANDSNAQEIEIESQKPKTPSSKQPLLSLLKDTLWFFSALLTFCPLSLLLSISQTISSSQFRLLDLTAIMSDKGERTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDDTDGRCPACRSPYDKEKIVGMAANCE 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0731 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 166 IPR013083 -
Pvu11g0731 166 SUPERFAMILY RING/U-box 94 159 - -
Pvu11g0731 166 Pfam RING/Ubox like zinc-binding domain 102 154 - -
Pvu11g0731 166 ProSiteProfiles Zinc finger RING-type profile. 102 150 IPR001841 -
Pvu11g0731 166 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 94 166 IPR039780 GO:0004842|GO:0030014
Pvu11g0731 166 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 94 166 - -
Pvu11g0731 166 CDD mRING-HC-C4C4_CNOT4 102 151 IPR039515 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0731 Pvu-Chr11 6356061 6357870 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0731 K10643 - pvu:PHAVU_011G0712000 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1429 5 36691020 36703078 Pvu11g0731 11 6356061 6357870 PCT