Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0594 ATGAAGGCTTTTTTGTTTGTGTTTGTGGCCCTTACGTTGTGTGGTTATGCTGTTGCTAAAGAGTGCACAAACATTCCTACACAATCTCATACATTCAGGTATGAGCTATTGACATCAAAGAATGCAACATGGAGGGAGGAGGTGATGTCTCACTACCATTTGACTCCAACGGATGAAACTGCTTGGGCTGATTTGCTTCCGAGGAAGTTCTTGACAGAACAGAACCAACATGATTGGGGGATGATGTACAGGCAAATCAAGAACACGGGTGTGTCCAAGTCACCTGAAGGATTTCTGAAAGAAGTGCCTCTTGGGCAGGTGAGGTTGCATGAGGATTCAATCCATGGTAGAGCACAGAAGACAAACTTGGAGTATCTGTTGATGTTAGATATGGACAGATTGATTTGGAGCTTTAGGAAGACAGCTGGTCTATCCACACCTGGGACTCCTTATGGAGGGTGGGAAGGTCCAGGAGTTGAGCTTCGGGGTCATTTTGTTGGGCATTACTTGAGCGCATCAGCTCTAATGTGGGCCAGCACACAGGATGAGAGCCTGAAGCAGAAAATGCAATATCTTGTTGCTGGCCTGTCTACTTGTCAGGAGAAGATAGGGACTGGATATCTATCTGCATTTCCATCTGAGTTGTTTGATCGATTTGAATCTGTTCAACAAGTTTGGGCTCCCTATTATACCATTCACAAGATTTTGGCTGGCCTCTTGGATCAACATATATTTGCTGGAAACCCTCAAGCTCTAAAAATGGTAAAGTGGATGGTTGATTACTTCTACGACAGAGTGCACAGTGTAATAACAAAGTACACTATAAATAGACACTATGAATCACTGAACGAGGAAACTGGAGGAATGAATGATGTCCTTTACAAATTATATAGCATAACAGGGGATTCTAAACATCTATTGTTGGCTCACCTTTTTGACAAGCCCTGCTTTTTAGGGTTGCTTGCAGTGCAGGCTAGTGACATAGCTGATTTTCATGCTAATACACATATCCCAATTGTTGTTGGATCTCAAATGCGATATGAAGTCACAGGCGATCCACTTTATAAGGAAATTGGGACATTCTTTATGGACCTCGTAAACTCTTCTCACAGCTATGCAACTGGAGGGACATCAGTCAGCGAGTTTTGGAGTAATCCAAAGAGAATAGCAGACAACTTAGGAACGACAGAGAATGAAGAGTCATGCACGACTTATAATATGTTGAAGGTTTCACGCCACCTCTTTAAATGGACCAGAGAAGTCTCTTATGCAGACTATTATGAGCGTGCCTTGACCAATGGAGTGCTTAGCATTCAAAGAGGAACAGATCCTGGGGTGATGATTTACATGCTTCCACTAGGTTTTGGGGTTTCCAAGGCTAAAACTGGACATAGTTGGGGAACACCGCTTGACTCTTTCTGGTGCTGCTACGGAACAGGAATTGAATCATTCTCAAAGCTGGGGGATTCTATCTATTTTGAAGAGCAAGGGAAAGATCCTTCACTTTACATCATTCAGTACATATCAAGCTCGTTTAATTGGGAATCTGGCAAAATTTTGCTCAATCAGAAAGTTGTTCCAGCTTCTTCATGGGATCCTTACCTTCGAGTGACATTTACGTTTTCTCCAGTTGAGAGTACTTCGTCTACACTGAACTTTCGACTACCAAGTTGGACAAGTCTAGATGGTCCCAAGGGGATATTAAATGATGAATCATTATCGCTGCCAACTCCAGGGTCTTTTTTGTCAATCACAAGAGAATGGAGTGCTAGTGACAAGCTCACCCTTCAGCTGCCACTTACTGTAAGAACAGAGGCCATAAAAGATGACAGGCCTCAATATGCATCTGTTAAAGCAATTCTTTATGGTCCTTATCTTCTTGCCGGTCATACGAGTGGGGGTGATTGGGACATTGAAGCTAAAAATGCAGACTGGATCACTCCTATTCCTGCCAGTTACAATAGCCAACTAGTTTCATTTTTCCAAGACTTTGAAAAATCAACTTTTGTGTTGGCAAATTCAAACCAATCACTTGCAATGCAAAAGTTGCCTGAATCTGGCACTGATTTGGCTCTAAGGGCAACCTTCAGGCTTGTCCTAAAAGAATCTTCCTCAAAGTTTTCAACATTGGCAGATGCTTATGGTAGATCAGTGATGTTAGAACCATTTGATCTTCCTGGAATGAATGTGATTCACCAAGGAGAAGACAAACCTCTTCTCATTGTAGATTCTTCAGATGGCAAGCCATCTTCTGTTTTTCTTATGGTTCCAGGATTGGATGGAAGAAATGAAACCATATCTTTAGAATCACAGAGTGACAAGGGCTGCTATGTGTATGGTGCTTTGAGCTCTAGTGCTGGAGTCAAACTCAGTTGCAAATCTGATTCTGATTCTTCTTTTAAGCAAGCAACAAGCTTTGTTGCTAGGGAAGGATTGAACCAATACAATCCTATCAGTTTTGTGGCTAAAGGAGCAAACAAGTATTTTCTTTTGCAGCCATTATTCTCATTCAGAGATGAGTTCTATACAGTATATTTCAATATTCAAGATTGA 2553 0.4179 MKAFLFVFVALTLCGYAVAKECTNIPTQSHTFRYELLTSKNATWREEVMSHYHLTPTDETAWADLLPRKFLTEQNQHDWGMMYRQIKNTGVSKSPEGFLKEVPLGQVRLHEDSIHGRAQKTNLEYLLMLDMDRLIWSFRKTAGLSTPGTPYGGWEGPGVELRGHFVGHYLSASALMWASTQDESLKQKMQYLVAGLSTCQEKIGTGYLSAFPSELFDRFESVQQVWAPYYTIHKILAGLLDQHIFAGNPQALKMVKWMVDYFYDRVHSVITKYTINRHYESLNEETGGMNDVLYKLYSITGDSKHLLLAHLFDKPCFLGLLAVQASDIADFHANTHIPIVVGSQMRYEVTGDPLYKEIGTFFMDLVNSSHSYATGGTSVSEFWSNPKRIADNLGTTENEESCTTYNMLKVSRHLFKWTREVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGFGVSKAKTGHSWGTPLDSFWCCYGTGIESFSKLGDSIYFEEQGKDPSLYIIQYISSSFNWESGKILLNQKVVPASSWDPYLRVTFTFSPVESTSSTLNFRLPSWTSLDGPKGILNDESLSLPTPGSFLSITREWSASDKLTLQLPLTVRTEAIKDDRPQYASVKAILYGPYLLAGHTSGGDWDIEAKNADWITPIPASYNSQLVSFFQDFEKSTFVLANSNQSLAMQKLPESGTDLALRATFRLVLKESSSKFSTLADAYGRSVMLEPFDLPGMNVIHQGEDKPLLIVDSSDGKPSSVFLMVPGLDGRNETISLESQSDKGCYVYGALSSSAGVKLSCKSDSDSSFKQATSFVAREGLNQYNPISFVAKGANKYFLLQPLFSFRDEFYTVYFNIQD* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0594 850 PANTHER PROLINE-TRNA LIGASE (DUF1680) 7 849 - -
Pvu11g0594 850 SUPERFAMILY Six-hairpin glycosidases 144 438 IPR008928 GO:0005975
Pvu11g0594 850 Gene3D - 711 839 - -
Pvu11g0594 850 SUPERFAMILY AbfB domain 716 831 IPR036195 GO:0046373|GO:0046556
Pvu11g0594 850 PANTHER - 7 849 - -
Pvu11g0594 850 Pfam Beta-L-arabinofuranosidase, GH127 107 628 IPR012878 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0594 Pvu-Chr11 4968003 4974688 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0594 K09955 - gmx:100781521 1508.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1538 5 37657125 37663216 Pvu11g0594 11 4968003 4974688 PCT