Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0593 ATCCATTATTTTCCAATCCTATATATATCCCTCCTACGTGCCTATGCTATCATAGCTATTTTACCTCATTTCAAAAATCAAATTCCAAGGAAGATGAAGGGTTTTGTGTCTGTGTTTGTGGTGCTGGTGTTGTGTGGCTGTGCTGTTGCTAAAGAATGCACAAACATTCCAACGCAATCTCATACCTTAATGTATGAGCTATTGTCATCCAAGAATGAAACGTGGAAGGAAGAGATGATGTCTCACTTCCATTTGACGCCAACGGATGAATCTGCGTGGGCTGATTTGCTGCCGAGGAAGTTCTTGTCAGAACGACAGCAACATGATTGGGCGGTTATGTATAAGAAAATCAAGAACATGGGTGTGTTCCAGTCACCTGAAGGTTTTCTAAAAGACGTGCCTCTTGAGGATGTGAGGTTGCATGAGTATTCCATCCATGGCATAGCACAGCAAACAAACTTGGAGTATCTGTTGATGTTTGATGTGGACAGGTTGATTTGGAGCTTCAGGAAGACAGCTGGTTTACCTACTCCTGCTGCTCCTTATGGAGGGTGGGAAGAACCAGGATGTGAGCTTCGGGGTCATTTTGTTGGGCATTACTTGAGCGCATCAGCTCTAATGTGGGCCAGCACACAGAACGATAACCTGAAACAGAAAATGACATCTCTTGTTGCTGGTCTGTCTGCCTGTCAGGAGAAAATAGGAACGGGATATCTATCTGCATTTCCATCTGAGTTTTTTGATAGAGTTGAAGCTATTAAAGGAGTTTGGGCTCCATATTATACCATTCACAAGATTCTGGCTGGTCTCTTGGATCAATATACATTTGCTGGAAACTCTCATGCTCTAAATGTGGTAACATGGATGGTTGACTACTTCTACAACAGAGTGCAGAATGTAATAACAAAGTACACTATAAATAGACACTATCAATCACTGAACCAGGAAACTGGAGGAATGAATGATGTCCTTTACAGATTATACAGCATAACAGAAGATTCTAAGCATATGCTTTTGGCTCAACTTTTTGACAAGCCGTGCTTTTTAGGGTTGCTTGCAGTGCAGGCTAATGACATAGCTGACATGCATGCTAATACGCATATCCCAATTGTTGTTGGATCACAAAGGCGATATGAAATCACAGGCGATCCACTTTCTAAGGATATTGGGACATTCTTTATGGAAACCATAAACTCTTCTCACAGCTATGCAACTGGAGGGACATCTGTCGGCGAATTCTGGAGAGATCCTAAGAGAATAGCAGATACCTTAAAAACAACAGAGAATGAAGAATCGTGCACGACTTATAATATGTTAAAGGTTTCACGCCACCTGTTTAGATGGACCAAAGAAGTCTCTTATGCAGACTATTATGAGCGTGCATTAATCAATGGAGTGCTCAGCATTCAAAGAGGAACAGATCCTGGAGTGATGATTTATATGCTTCCACTAGGTCTTGGCGTTTCCAAGGCTATAACATTCCACGGTTGGGGAACACCATTTGACACTTTCTGGTGCTGCTATGGAACGGGAATTGAATCATTCTCAAAGTTGGGGGATTCTATATATTTCGAAGAAGAAGGGAAAAATCCTACACTTTACGTCATTCAGTACATATCAAGCTCATTTAATTGGAAATCTGGAAAACTTTTGCTCAATCAGACAGTTGTTCCAGCTGCTTCATGGGATCCTTACTTACGAGTGACATTTACGTTTTCTCCATTTGAGAAAGTACTTAGTGATGATGAGAATACTTGGAGTGCATTGAACTTTCGACTGCCTACTTGGACTAGTCTAGATGGTGCCAAGGGGATATTAAATGGTGAAACTTTGTCTCTTCCAGCTCCAGGAAATTATTTGTCAATCACAAGACAGTGGAGTGCTAGTGACAACCTGACCCTTCAGTTGCCCCTTACCACAAGAACAGAGGCCATAAAAGATGACAGGCCTGAATATGCATCTATTCACGCAATTCTTTATGGTCCTTATCTTCTTGCCGGTCATACCCTCGGTGGTGATTGGGACCTTAAATCTGGGGCTAATACTTCCGAATGGATAACTCCTATTCCAGAAAGTTACAATAGTCAACTAGTTTCTTTTTCCCAATTCTTTGAAAATTCAACTTTTGTTTTAGTAAATTCAAACCAATCACTTGGAATGCAAAAGTTTCCTGAATCTGGAACAGACTTGGCTCTTCAGGCAACTTTTAGGCTTGTCCCAAAAGAATCTTCCTCAAAGTTTTCAACATTGGCAGATGCTAATGATAGATCAGTAATGTTAGAACCATTTGATCTTCCTGGAATGAATGTGATTCACCAAGGAGCAGATAAACCTCTTCTCATTGTAGATTCTTCAGATGGCAAGCCATCTTCTGTTTTTCTTGTGGTACCAGGATTGGATGGAAGAAATGAAACCATATCTTTAGAATCACAGAGTGACAAGGGCTGCTATGTGTATAGTGGTTTGAGCTCTAGTGCAGGAGTCAAACTCAGTTGCAAATCTGATTCTGATGCTACGTTTAACCAAGCAACAAGCTTTATTTCTCAAAAAGGATTGAGCCAATACAATGCTTTGAGTTTTGTGGCTAAAGGCTTAAACAGAAACTTTCTTTTGGAGCCCTTATTCTCATTCAGAGATGAACATTATACAGTTTACTTCAACCTTAAAGGTTGA 2673 0.407 IHYFPILYISLLRAYAIIAILPHFKNQIPRKMKGFVSVFVVLVLCGCAVAKECTNIPTQSHTLMYELLSSKNETWKEEMMSHFHLTPTDESAWADLLPRKFLSERQQHDWAVMYKKIKNMGVFQSPEGFLKDVPLEDVRLHEYSIHGIAQQTNLEYLLMFDVDRLIWSFRKTAGLPTPAAPYGGWEEPGCELRGHFVGHYLSASALMWASTQNDNLKQKMTSLVAGLSACQEKIGTGYLSAFPSEFFDRVEAIKGVWAPYYTIHKILAGLLDQYTFAGNSHALNVVTWMVDYFYNRVQNVITKYTINRHYQSLNQETGGMNDVLYRLYSITEDSKHMLLAQLFDKPCFLGLLAVQANDIADMHANTHIPIVVGSQRRYEITGDPLSKDIGTFFMETINSSHSYATGGTSVGEFWRDPKRIADTLKTTENEESCTTYNMLKVSRHLFRWTKEVSYADYYERALINGVLSIQRGTDPGVMIYMLPLGLGVSKAITFHGWGTPFDTFWCCYGTGIESFSKLGDSIYFEEEGKNPTLYVIQYISSSFNWKSGKLLLNQTVVPAASWDPYLRVTFTFSPFEKVLSDDENTWSALNFRLPTWTSLDGAKGILNGETLSLPAPGNYLSITRQWSASDNLTLQLPLTTRTEAIKDDRPEYASIHAILYGPYLLAGHTLGGDWDLKSGANTSEWITPIPESYNSQLVSFSQFFENSTFVLVNSNQSLGMQKFPESGTDLALQATFRLVPKESSSKFSTLADANDRSVMLEPFDLPGMNVIHQGADKPLLIVDSSDGKPSSVFLVVPGLDGRNETISLESQSDKGCYVYSGLSSSAGVKLSCKSDSDATFNQATSFISQKGLSQYNALSFVAKGLNRNFLLEPLFSFRDEHYTVYFNLKG* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0593 890 Pfam Beta-L-arabinofuranosidase, GH127 137 666 IPR012878 -
Pvu11g0593 890 Gene3D - 752 878 - -
Pvu11g0593 890 PANTHER - 36 889 - -
Pvu11g0593 890 PANTHER PROLINE-TRNA LIGASE (DUF1680) 36 889 - -
Pvu11g0593 890 SUPERFAMILY Six-hairpin glycosidases 196 469 IPR008928 GO:0005975
Pvu11g0593 890 SUPERFAMILY AbfB domain 758 871 IPR036195 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0593 Pvu-Chr11 4957673 4964100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0593 K09955 - gmx:100791803 1486.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0593 11 4957673 4964100 Pvu5g1538 5 37657125 37663216 PCT