Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0579 ATGAACAAGGATATGGTATTCAATGGCTATCAATGTCTTCTCCTTGTTGGAGTCTTCACTCTCGTTGTAAGCTTCTCCTTTACAATCACACAAGCTGCTGCGCCTGTTCTTGATGTTTCTTCTCTTAATCGAACCAGTTTTCCCCCAGCTTTCATCTTTGGCACTGCCTCCTCAGCCTACCAGTACGAAGGTGCTGCAAATGAAGGAGGGAGAGGACCAAGTATATGGGATACTTATTCTCATAAATATCCAGAAAAGATATCAGATAGAAGCAACGGAGATGTAGCTGTTGATCAATATCATCGCTATAAGGAAGATGTTGGGATCATGAAGTATATGAACACTGATGCTTACAGATTCTCCATCTCGTGGTCAAGGATACTGCCAAAAGGAAGAATTAGCGCGGGTATAAACCAAGAAGGAATCAAATATTACAACAATCTCATCAACGAACTAGTGGCTAAGGATATTCTGCCATTTGTGACCCTTTTCCATTGGGATCTTCCCCAAGCCTTAGAAGATGAATACGGTGGCTTCTTAAGCCCTCATATTATAAATGATTTCCAAGACTACGCAGAGCTATGCTTTAAGGAATTTGGAGATAGAGTGAGACATTGGATTACTTTTAATGAGCCATGGAGTTACAGTATGGGCTCAGAGCCCTACATGAGCTCACACTACCAACTTCTTGCTCATGCAGCAGCTGTCAAAATTTATAAAACCAATTATCAGGCATTTCAAAATGGTTTGATAGGCATCACCTTAAATTGTCACTGGTTTATTCCCTTCTCAAATGACACATTAGATCATCAAGCTGCCCAACGAGCTCTTGATTTCATGTTTGGATGGTTTATGCAACCACTTACAAGAGGAAAGTATCCAAAAAGCATGCATTCTTTGCTGGGAAACCGATTACCAAACTTCACTGAAGAGCAATCCAAGCTACTTATTGGCTCGTTTGATTTTATTGGACTCAATTACTACACAACTAATTATGCTGCCCACATATCCCATGCAATTAACAGCACAGGAAATACTAGCTATATCCAGGATACTCGTGTCAATTTTACAACTGAACGTCACGGGTCACCCATTGGACCAAGAGCTGGTTCATCTTGGCTATATGTTTATCCAAGGGGACTTAGAGAACTATTGCTCTACATCAAGATGAAGTATAAAAACCCTGTAATTTACATAACAGAAAATGGCATGGACGAGTCCAATGATCCAACACTATCACTTGAAGAGTCACTCATGGATACTTATAGAATTGACTACTTCTATCGCCATCTTTATTATATTTTGATCTCAATCAAGAATGGGGTGAAAGTACATGGATACTTTGCATGGTCGCTTCTGGACAACTTTGAATGGAATTCTGGCTACACCTTGCGTTTTGGAGTTAACTTCGTCGATTACAAGGATAATTTGAAAAGACACCAGAAGCTCTCTGCTCATTGGTTCAGGAATTTTCTTCAAAAACAATAG 1488 0.3992 MNKDMVFNGYQCLLLVGVFTLVVSFSFTITQAAAPVLDVSSLNRTSFPPAFIFGTASSAYQYEGAANEGGRGPSIWDTYSHKYPEKISDRSNGDVAVDQYHRYKEDVGIMKYMNTDAYRFSISWSRILPKGRISAGINQEGIKYYNNLINELVAKDILPFVTLFHWDLPQALEDEYGGFLSPHIINDFQDYAELCFKEFGDRVRHWITFNEPWSYSMGSEPYMSSHYQLLAHAAAVKIYKTNYQAFQNGLIGITLNCHWFIPFSNDTLDHQAAQRALDFMFGWFMQPLTRGKYPKSMHSLLGNRLPNFTEEQSKLLIGSFDFIGLNYYTTNYAAHISHAINSTGNTSYIQDTRVNFTTERHGSPIGPRAGSSWLYVYPRGLRELLLYIKMKYKNPVIYITENGMDESNDPTLSLEESLMDTYRIDYFYRHLYYILISIKNGVKVHGYFAWSLLDNFEWNSGYTLRFGVNFVDYKDNLKRHQKLSAHWFRNFLQKQ* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0579 495 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 51 65 IPR033132 -
Pvu11g0579 495 PRINTS Glycosyl hydrolase family 1 signature 319 333 IPR001360 GO:0004553|GO:0005975
Pvu11g0579 495 PRINTS Glycosyl hydrolase family 1 signature 397 405 IPR001360 GO:0004553|GO:0005975
Pvu11g0579 495 PRINTS Glycosyl hydrolase family 1 signature 420 431 IPR001360 GO:0004553|GO:0005975
Pvu11g0579 495 PRINTS Glycosyl hydrolase family 1 signature 441 458 IPR001360 GO:0004553|GO:0005975
Pvu11g0579 495 PRINTS Glycosyl hydrolase family 1 signature 465 477 IPR001360 GO:0004553|GO:0005975
Pvu11g0579 495 Pfam Glycosyl hydrolase family 1 45 494 IPR001360 GO:0004553|GO:0005975
Pvu11g0579 495 PANTHER GLYCOSYL HYDROLASE 7 495 IPR001360 GO:0004553|GO:0005975
Pvu11g0579 495 SUPERFAMILY (Trans)glycosidases 35 493 IPR017853 -
Pvu11g0579 495 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 7 495 - -
Pvu11g0579 495 Gene3D Glycosidases 28 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0579 Pvu-Chr11 4821539 4825564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0579 18 495 Glycoside Hydrolase AT5G44640 50.297 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0579 - K01188 var:108339449 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1553 5 37788284 37795351 Pvu11g0579 11 4821539 4825564 PCT