Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0575 ATGGCATTCAGTGGTTATTTCTTTCTTGGCTTTCTTGCTCTTGTTCTTATTATAAGATGTTCCAAAGTTACATGCGAAGAAGCAGTTTCAGTGTCACCTATTGACACTTCTCTAAATCGAAACAGTTTCCCTGAAGGGTTCATCTTTGGGGCGGGATCTTCTTCCTATCAGTTCGAAGGTGCAGCAAGAGAAGGTGGTAAAGGAGCAAGTGTGTGGGATACTTTCACACATAAACATCCAGATAAGATCAAGGATAGAAGCAATGGGGACGTTGCCATTGACTCGTATCACCACTACAAAGAAGATGTAGGGATGATGAAGGATATGAATTTGGATTCATATAGATTTTCCATATCTTGGTCAAGGATTCTGCCAAGAGGAAAGCTAAGTGGAGGTATAAATCAAGAAGGAATCAATTATTACAACAATTTTATCAATGATTTAGTGGCTAATGACATAAAACCATTTGTGACTCTTTTCCATTGGGATCTTCCCCAAGTACTGGAAGATGAGTATGATGGTTTTTTGAGTCCCCTGATAATGAAAGATTTTCAAGACTATGCAGAACTTTGTTTCAAGGAATTTGGTGATAGGGTGAAGTATTGGGTTACATTGAACGAACCATGGAGTTACAGTCTATTTGGCTATGCAAATGGACGAATGGCACCAGGTCGTTGTTCTGCTTGGATGAATTCAAATTGCACTGGTGGTGATTCTGCAACAGAGCCATATTTGGTTAGTCATCACCAACTTCTTGCTCATGCAGCAGTTGTTGGTGTCTACAAGACCAAGTATCAGGCCTCTCAGAAAGGTGTGATAGGCATAACTGTAGTAGCTAACTGGTTTTTGCCATTAAGAGATAGTATACTTGATCATAAGGCTAGTGAGAGAGCAATTGACTTCATGTATGGATGGTTTATGGATCCACTAACATTTGGAGATTATCCAAAAAGCATGCACTCCCTTGTGGGAGCAAGATTGCCAAAGTTTACTCCTCAACAAGCCAAACTACTTGTTGGTTCATTTGATTTTATTGGTCTAAATTATTACTCTACCACGTATGTCTCTGATGCACCTCATCTAAGCAATGTCAAACCTAGCTACATAACAGATTCTCATCTCATTCTTGCTTATGAACGTGATGGGAAACCTATTGGAATAAAGATTGCTTCTGATTGGTTATATGTTTATCCAAGAGGAATTCGTGATCTTTTACTATATACAAAGGAAAAATACAACAATCCTTTAATTTACATTACTGAGAATGGTATAAATGAGTACAATGATCCAACATTATCAGTTGAAGAATCCCTTATGGATATCTTTAGAATTGATTATCATTATCGTCATCTCTTTTATATTAAATCTGCAATAAGGAATGGCGCAAATGTAAAAGGATATTATGTGTGGTCTTTGTTTGACAATTTTGAGTGGTTTTTAGGCTATACATCACGATTTGGAATGATCTTCGTGGATTATGAAAATAGTTTAAAGAGATACCAAAAAATCTCTGCATTATGGTTCAAAAAATTTCTCAAGAAGGAAATTGAGCATTAA 1557 0.3693 MAFSGYFFLGFLALVLIIRCSKVTCEEAVSVSPIDTSLNRNSFPEGFIFGAGSSSYQFEGAAREGGKGASVWDTFTHKHPDKIKDRSNGDVAIDSYHHYKEDVGMMKDMNLDSYRFSISWSRILPRGKLSGGINQEGINYYNNFINDLVANDIKPFVTLFHWDLPQVLEDEYDGFLSPLIMKDFQDYAELCFKEFGDRVKYWVTLNEPWSYSLFGYANGRMAPGRCSAWMNSNCTGGDSATEPYLVSHHQLLAHAAVVGVYKTKYQASQKGVIGITVVANWFLPLRDSILDHKASERAIDFMYGWFMDPLTFGDYPKSMHSLVGARLPKFTPQQAKLLVGSFDFIGLNYYSTTYVSDAPHLSNVKPSYITDSHLILAYERDGKPIGIKIASDWLYVYPRGIRDLLLYTKEKYNNPLIYITENGINEYNDPTLSVEESLMDIFRIDYHYRHLFYIKSAIRNGANVKGYYVWSLFDNFEWFLGYTSRFGMIFVDYENSLKRYQKISALWFKKFLKKEIEH* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0575 518 Pfam Glycosyl hydrolase family 1 40 514 IPR001360 GO:0004553|GO:0005975
Pvu11g0575 518 PRINTS Glycosyl hydrolase family 1 signature 341 355 IPR001360 GO:0004553|GO:0005975
Pvu11g0575 518 PRINTS Glycosyl hydrolase family 1 signature 417 425 IPR001360 GO:0004553|GO:0005975
Pvu11g0575 518 PRINTS Glycosyl hydrolase family 1 signature 440 451 IPR001360 GO:0004553|GO:0005975
Pvu11g0575 518 PRINTS Glycosyl hydrolase family 1 signature 461 478 IPR001360 GO:0004553|GO:0005975
Pvu11g0575 518 PRINTS Glycosyl hydrolase family 1 signature 485 497 IPR001360 GO:0004553|GO:0005975
Pvu11g0575 518 ProSitePatterns Glycosyl hydrolases family 1 active site. 417 425 IPR018120 -
Pvu11g0575 518 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 47 61 IPR033132 -
Pvu11g0575 518 Gene3D Glycosidases 29 514 - -
Pvu11g0575 518 SUPERFAMILY (Trans)glycosidases 38 513 IPR017853 -
Pvu11g0575 518 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 3 516 - -
Pvu11g0575 518 PANTHER GLYCOSYL HYDROLASE 3 516 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0575 Pvu-Chr11 4791882 4796295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0575 8 515 Glycoside Hydrolase AT5G44640 51.670 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0575 - K01188 gmx:100813623 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0575 11 4791882 4796295 Pvu11g0575 11 4791882 4796295 ECH
Pvu5g1562 5 37870868 37876006 Pvu11g0575 11 4791882 4796295 PCT