Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0441 ATGTGTGACATTATAGCTATGCCGTCCATGCCTATTACAGATCGACCTGCTAAAGGTGTTGAGATGGAATATTTAGAGGATGATAAGAAGACAAAGCTTGGCTCTTTAAAGAAGGTAGCAATCAGTGCATCTTCAAAGTTCAAGCATTCCTTGCAAAAGAAGGGGAGGAGGCATAGCAGGGTTATGTCTATTGCTATTGAGGATGAAGTTGATGCAGAAGAGTTACAATCCGTTGATGCTTTTCGCCAAACACTCATCTTGGAAGAGCTATTACCCTCAAAACATGATGATCATCATATGATGTTAAGGTTCTTGAGAGCAAGAAAATATGACATTGAGAAAACAAAACAAATGTGGGCAGATATGCTTCAGTGGAGGAGGGAGTTTGGTGCTGACACAATTATGGAGGATTTTGAGTTCAAGGAGTTGCAAGAAGTTCGAAAATACTACCCACAAGGGAATCACGGAGTTGATAAACAAGGGCTACCTATTTACATAGAAAGGTTGGGCCAGGTTGACTCTAACAAGCTGTTGCAGGTCACAACTTTGGATCGCTATCTTAAGTACCATGTGAGAGAATTTGAGAGGACATTCCTTGTTAAGTTCCCTGCTTGTTCCATCGCAGCCAAGAAACACATTGACCAAAGCACAACAATCTTGGATGTGCAAGGAGTGGGTCTCAAAAGTATGAACAAAGCTGCAAGGGATCTCATCCAGCGTCTTCAGAAGATTGATGGAGACAACTACCCAGAGACCTTAAATCGTATGTTCATCATTAATGCTGGTTCAGGATTTAGGCTGTTGTGGAACACTGTCAAGTCATTCCTTGATCCTAAGACCACGGCCAAAATCCATGTCCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATTGATGCCAGTGAACTTCCAGAGTTCTTGGGTGGTACTTGTACCTGTCGAGACAAAGGTGGTTGTTTGCTTTCAGACAAAGGACCATGGAATGACCCAGAAATCTTGAAGATGGTTCAAAATGGCGAAGGAAAATGCAAGAGAAAAACTTTATCCGGGATTGAAGTGAAAACCATCATTGAGGAGGATACAGCATGTCAAAAGGAATACGATTCTTTAAACAAAGAATCTGCAGCCGTGGAGCATCCCAGTACTAGTCCAAAAGTGACCTTTGCCCCAGTGAATAATACATCATGGGAAAAAACAGAACAAAATGATGAGTTAGGCCTTTCTAAAGATTGTTCGCCTAGCAACAACAGTTCTAAGGGGTTTAGAATCCCTTTTACTGGTGGAATCATGTCCATTATTATGGGAGTGATAGCAATGATCCGAATGGCGAAGAACATGCCAAGGAAAATCACTGGAGCTGAGTTGTTTGGTAACACAGCATATTGTAGTAGCAACGAGATGAAAACACCTGACATTTCCATGGATGATCAAATGCCCATGATGAAGCGCATCGTTGAACTAGAAGAGAAGGTGAATGAGCTCTCTAAGAAACCTGTCATGCCACCTGAGATGGAAGAATTGCTGAATAAAACCCTTAACAGAGTCAGCACGCTCGAGCAAGAGTTGGTTATTACCAAAAAATCACTTGACGATGCCTTTACCCGACAAGTAGAGCTTCAAACTCAAATTGACAAAAAGAAAAAGAAGAATTCCGCTGGTAAAGTGTTGGGCATCCATTGCTGTCTGACCTGA 1695 0.4183 MCDIIAMPSMPITDRPAKGVEMEYLEDDKKTKLGSLKKVAISASSKFKHSLQKKGRRHSRVMSIAIEDEVDAEELQSVDAFRQTLILEELLPSKHDDHHMMLRFLRARKYDIEKTKQMWADMLQWRREFGADTIMEDFEFKELQEVRKYYPQGNHGVDKQGLPIYIERLGQVDSNKLLQVTTLDRYLKYHVREFERTFLVKFPACSIAAKKHIDQSTTILDVQGVGLKSMNKAARDLIQRLQKIDGDNYPETLNRMFIINAGSGFRLLWNTVKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCRDKGGCLLSDKGPWNDPEILKMVQNGEGKCKRKTLSGIEVKTIIEEDTACQKEYDSLNKESAAVEHPSTSPKVTFAPVNNTSWEKTEQNDELGLSKDCSPSNNSSKGFRIPFTGGIMSIIMGVIAMIRMAKNMPRKITGAELFGNTAYCSSNEMKTPDISMDDQMPMMKRIVELEEKVNELSKKPVMPPEMEELLNKTLNRVSTLEQELVITKKSLDDAFTRQVELQTQIDKKKKKNSAGKVLGIHCCLT* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0441 564 SUPERFAMILY CRAL/TRIO domain 142 338 IPR036865 -
Pvu11g0441 564 CDD SEC14 140 311 IPR001251 -
Pvu11g0441 564 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 9 552 - -
Pvu11g0441 564 PRINTS Cellular retinaldehyde-binding protein signature 100 122 - -
Pvu11g0441 564 PRINTS Cellular retinaldehyde-binding protein signature 269 288 - -
Pvu11g0441 564 PRINTS Cellular retinaldehyde-binding protein signature 302 311 - -
Pvu11g0441 564 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 9 552 - -
Pvu11g0441 564 SMART sec14_4 142 313 IPR001251 -
Pvu11g0441 564 Pfam CRAL/TRIO, N-terminal domain 94 121 IPR011074 -
Pvu11g0441 564 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 142 316 IPR001251 -
Pvu11g0441 564 Pfam CRAL/TRIO domain 148 310 IPR001251 -
Pvu11g0441 564 SUPERFAMILY CRAL/TRIO N-terminal domain 68 138 IPR036273 -
Pvu11g0441 564 Gene3D - 130 341 IPR036865 -
Pvu11g0441 564 SMART CRAL_TRIO_N_2 97 122 IPR011074 -
Pvu11g0441 564 Gene3D - 62 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0441 Pvu-Chr11 3734608 3738850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0441 103 307 Acyl Lipid Metabolism Gene Families AT5G47730 28.986 2.51e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0441 - - gmx:100792335 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0441 11 3734608 3738850 Pvu11g0441 11 3734608 3738850 ECH
Pvu11g0441 11 3734608 3738850 Pvu3g2646 3 48479752 48484017 ECH