Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1627 ATGGAGCTTGATGCTCATGTTAATAATGATGTGATACCTTATTCAGGAACGCAACCCAATAAGCGGATGAGAAAAAAGTCTATGGTCTGGGACTACTTCACAGTAGAAGCTCTTGGAGCTGGATGTACCAGGGCTTACTGTAACCAATGCAAAAAATCATTTTCTTATATAACTGATTCAAAACAAGCTGGTACAAGCCATCTGAAAAGACACATTTCTTTGGGAATCTGTCAAGTACTTCGGGAGAAAAACCAACAAAGCTCATATCCCAAAACAGATGGTAATCAATATACTGCCAATCCACCCAAGAAACGGCCAAGAGAAAATTCTAGGTTTACTGGTAATGGTATCTCATTTGATGAGGAGCGTTGCAACCAAGATGTTGCCAAAATGGTAATTTTACATGATTATCCTCTTCATATTGTGAAGCAACAGGGTTTCATTGATTTTGTCCGGATTCTTCAACCCCAGTTTAATCCATCATGTCTAAATTCTGTTGAAAGGGATTGTGTTGCTATTTACCTCAGGAAAAAGCAAAATCTGTTGAATGTTATCAATGTGATTCCTGGACAAGTCAACCTGACATTGGAATTGTGCACTTCGAACCAGGCAATGGGCTATGTCTTTGTTCGAGGACACTTCATTGATAATGATTGGAACTTACATCGTCCTATTCTCAATGTTGTTACAGTACCATTTCCTGGTTCTGAAGACTCTTTAAATCAAACTTTAGTGACCTGCTTATCCGATTGGCATTTGGAGGGTCGGCTGTTTACCCTCGCTCTTGATAAATCCTTTTCCAGTGAGAATGTGATAGAAAATCTGAGAGACCTACTCTCTGTTAAGAACCCTACCATCCTCAATGGTCAGTTGTTAAACCAGAATTGTTATGCTCGTGTGCTTAGTCGCCTTGCAGCTGATGCACTATGGGCAATGAGAGAAACTATTAGCAAGGTTCGTGACAGTGTAAAGCATGTGAATTCTTCCGAACCCCATAAAGAGAAGTTTATTGACTTGAAGCAACAATTACAAGTACCTAGTGTGGTGAATCTTTCAATTGATGACCCCTGTAAATGGGACACGACTTATCTTATGCTTGTAGCTGCCTGTGAACTAAAGGAAATCTTCATCTGCCTTGATACCACTGATCCTGATTACAGAATGACTCTAACAATGGATGACTGGAAGCAGGTTGAAACTCTCTGCACATATTTGAAGTATTTGTATGACGCAGCCAAAATTTTGACTCAGCAACCATACCCAACTTCAAACTTATTTTTTGCTGAAGTGTCAAAAGTTCAGGTGGAGTTGACACAAGCAGCCTTCATCCAGGATCCTTTTATAAGAAGTTTAATTTTTCCTTTGCATGAGAACTTTGACCAATATTGGAGAGAAAGCTGCATCATCTTGGCAATTGCTGTAGCTATGGACCCAAGGCATAAAATGAAACTTGTGGAATTTACCTTTGCCAAGACATTTGGTGAGAATGCTGCGGCCTGGATAAAGATAGTTGAGGATGGTCTTCGTGATCTATTCATTGAATATAGCACCCAAATGTTTCTTACAGCAACAAATGATGATGATGGGGATGACATTATGATAAAAGAAACATATCAAGAAGGGTCTATTGACTGCTCACTTTTTGTTGATGGGGATGAACTTTCCGATTATGAATTTTATATATCTGATTTCACTGGTAACCCTCAATTTAAGTCAGAATTGGAAGAGTATCTGGAAGAGCCTCTTCTGAGCAGAGCAGAGGAATTTGATATTCTGAGCTGGTGGAGAGTAAATGGATTGAAATACCCAACATTGTCTAGAATCGCATCTGATATTTTGTCTTTACCAGTTTCCACTCTTTCTGCAGATTCTGTTTTTGACACCCAGATTAGAAAAATAGATAGCTACCGTAGTTCTTTAAGCTCCCTCACTCTTGAGGCCCTTATTTGTGCCAAGGATTGGTTCCAGTCAGAATGA 1977 0.394 MELDAHVNNDVIPYSGTQPNKRMRKKSMVWDYFTVEALGAGCTRAYCNQCKKSFSYITDSKQAGTSHLKRHISLGICQVLREKNQQSSYPKTDGNQYTANPPKKRPRENSRFTGNGISFDEERCNQDVAKMVILHDYPLHIVKQQGFIDFVRILQPQFNPSCLNSVERDCVAIYLRKKQNLLNVINVIPGQVNLTLELCTSNQAMGYVFVRGHFIDNDWNLHRPILNVVTVPFPGSEDSLNQTLVTCLSDWHLEGRLFTLALDKSFSSENVIENLRDLLSVKNPTILNGQLLNQNCYARVLSRLAADALWAMRETISKVRDSVKHVNSSEPHKEKFIDLKQQLQVPSVVNLSIDDPCKWDTTYLMLVAACELKEIFICLDTTDPDYRMTLTMDDWKQVETLCTYLKYLYDAAKILTQQPYPTSNLFFAEVSKVQVELTQAAFIQDPFIRSLIFPLHENFDQYWRESCIILAIAVAMDPRHKMKLVEFTFAKTFGENAAAWIKIVEDGLRDLFIEYSTQMFLTATNDDDGDDIMIKETYQEGSIDCSLFVDGDELSDYEFYISDFTGNPQFKSELEEYLEEPLLSRAEEFDILSWWRVNGLKYPTLSRIASDILSLPVSTLSADSVFDTQIRKIDSYRSSLSSLTLEALICAKDWFQSE* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1627 658 Pfam Domain of unknown function (DUF4413) 417 515 IPR025525 GO:0003677
Pvu10g1627 658 MobiDBLite consensus disorder prediction 85 103 - -
Pvu10g1627 658 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 13 657 - -
Pvu10g1627 658 SUPERFAMILY beta-beta-alpha zinc fingers 27 81 IPR036236 -
Pvu10g1627 658 ProSiteProfiles Zinc finger BED-type profile. 24 84 IPR003656 GO:0003677
Pvu10g1627 658 MobiDBLite consensus disorder prediction 85 111 - -
Pvu10g1627 658 PANTHER BED FINGER-RELATED 13 657 IPR045259 -
Pvu10g1627 658 Pfam hAT family C-terminal dimerisation region 573 655 IPR008906 GO:0046983
Pvu10g1627 658 SUPERFAMILY Ribonuclease H-like 189 656 IPR012337 -
Pvu10g1627 658 SMART bed5 24 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1627 Pvu-Chr10 42523954 42528950 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1627 - - gmx:106799409 1132.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1627 10 42523954 42528950 Pvu10g1627 10 42523954 42528950 ECH
Pvu5g1852 5 40136239 40139218 Pvu10g1627 10 42523954 42528950 PCT