Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1624 ATGTCTGCTGCTGTGTGCGGAACCAAGAGATCCTTCTTCGAAGACCTTCCTCCGTCTCCGCCACTCTCCAAGAGGCTCCGCTGTTCCTCTTCGCCGATTCGCTTCCCTCCCCTCTCTCTCATCGACCAACTTCGCCCGCTCTTTCCCCACATGGACGACCTGGTTCTTGAGAGGGTTCTTCAGGAGTGTGGGAATGATATAGATGCTGCTATCAAGAGGCTGAACGAGCTTTGCTTGGGAAATGCAGATGGAAATAGAAATGCTGAAGGATCGGATGTTATTGTTAATTTGGATGCAGGTAAATTGGAAGATAATGGAAATGCTTCTGTTCCTGAGGACCAGCCTACTTTGAACAACCACCACCTTCCTGTAGATGGAGCAGAGTGGATTGACTTTTTTGTTAGGGAAATGATGGTTGCTACTAGTGTTGATGATGCTAGAGCCCGTGCTGCGAGAATGCTGGAAGTTCTAGAGAAATCAATCAGTGAAAGAGCAAGGGCTGAGGCAACTGATGCACTTCAGAAGGAAAATTTGATGCTGAAAGAACAAATTGAAGCATTGATTAAGGAGAAAAATTCTTTCAAAAATGCTTTTAGAATCCAGCATGAACGATTTGCTGATTACGAGGTTAAGAACCAGGAGTTGCAGCATTTGAAGCAATTGGTGTCTCAATACCAGGAGCAGATTAGAACTCTCGAGGTGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGAGCAACCCCTTTACAGGGAACTTCCCACCTGATATCTTCTAA 786 0.4542 MSAAVCGTKRSFFEDLPPSPPLSKRLRCSSSPIRFPPLSLIDQLRPLFPHMDDLVLERVLQECGNDIDAAIKRLNELCLGNADGNRNAEGSDVIVNLDAGKLEDNGNASVPEDQPTLNNHHLPVDGAEWIDFFVREMMVATSVDDARARAARMLEVLEKSISERARAEATDALQKENLMLKEQIEALIKEKNSFKNAFRIQHERFADYEVKNQELQHLKQLVSQYQEQIRTLEVNNYALAMHLKQAQQSNPFTGNFPPDIF* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1624 261 ProSiteProfiles CUE domain profile. 36 79 IPR003892 GO:0043130
Pvu10g1624 261 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 261 - -
Pvu10g1624 261 Pfam CUE domain 40 76 IPR003892 GO:0043130
Pvu10g1624 261 Coils Coil 170 197 - -
Pvu10g1624 261 CDD CUE 39 74 - -
Pvu10g1624 261 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 261 - -
Pvu10g1624 261 Gene3D - 39 79 - -
Pvu10g1624 261 Coils Coil 208 235 - -
Pvu10g1624 261 SUPERFAMILY UBA-like 40 82 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1624 Pvu-Chr10 42501791 42505542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1624 - - gmx:100813137 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1624 10 42501791 42505542 Pvu10g1624 10 42501791 42505542 ECH
Pvu5g1847 5 40107021 40109420 Pvu10g1624 10 42501791 42505542 PCT