Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1446 ATGAGCTTCAACAAGCTCATAGTGTGGAATGTGCCACTACTCTTGGTGGTGGTGGTTGCATGGTCACTGATCGGTCATGCTTCAGCTTCTGTGTCCTATGACCATAAAGCTATCACCATCAATGGACAAAGAAAGATACTGCTTTCTGGCTCCATTCACTACCCCAGAAGCACCCCTGAGATGTGGCCAGATCTTATTCAGAAGGCAAAGGAAGGAGGTTTGGATGTGATTCAAACTTATGTTTTCTGGAATGGGCATGAGCCTTCACGCGGCAAATATTACTTTGGGGGAAACTATGATCTGGTGAGGTTCATAAAACTGGTGCAGCAAGCAGGCCTCTATGTTAACCTCAGAATTGGTCCTTATGTCTGTGCTGAATGGAACTTCGGAGGTTTCCCTGTTTGGCTCAAGTACATTCCAGGTATCAACTTCAGGACAGACAATGGACCATTTAAGTTTGAAATGGAAAAGTTTACCAAGAAGATTGTGGATATGATGAAAGCAGAAAGGTTATTCGAGTCACAGGGTGGTCCAATAATTATATCTCAGATCGAAAATGAATATGGACCTCTGGAGTATGAAGTTGGTGCTCCCGGTAGAGCCTACACTCAATGGGCAGCTCATATGGCTGTAGGACTTGGCACTGGGGTTCCATGGATCATGTGCAAGCAAGATGATGCTCCTGATCCTATTGTTAATACTTGCAATGGCTTCTATTGTGACTATTTCTCTCCAAATAAGGCTTACAAACCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACTGAGTTTGGAGGTGCAGTTCCTCATAGACCTGCTGAGGACTTGGCATTTTCAATTGCACGGTTTATACAGAAAGGAGGATCATATGTCAACTATTATATGTATCACGGGGGAACAAATTTTGGACGAACTGCTGGTGGTCCCTTTATTGCTACAAGCTATGATTATGATGCACCTCTTGATGAATATGGACTGGCTAGACAGCCAAAGTGGGGTCATCTGAAAGATTTACACAGAGCAATAAAACTCTGTGAACCTGCTTTGATATCAGGAGATCCTACTGTACAACGGCTTGGAAACTATGAAGAGGCTCATGTCTTTAGATCAAAGTCTGGAGCTTGTGCTGCATTCCTTGCAAACTATAACCCGCAATCTTATGCAACGGTTGCATTTGGAAATCAGCATTACAATTTACCTCCTTGGTCTATTAGCATTCTTCCTAACTGCAAGCACACTGTTTATAACACTGCAAGGGTTGGTTCTCAGAGCACAACAATGAAGATGAGTCGTGTTCCTATTCATGGAGGACTATCTTGGAAAGCGTTTAATGAAGAGACAACCACTACTGATGATAGTTCCTTCACTGTGAGTGGCCTGTTGGAGCAGATAAATGCAACCAGAGATTTGTCTGACTACTTGTGGTACTCCACAGATGTTGTGATCAATCCCAATGAAGAATTTTTAAGGAATGGAAAGAATCCTTTTCTTACAGTTTTATCTGCTGGCCATGCTTTGCATGTTTTTATCAACAATCAGCTCTCAGGAACTGCATATGGAAGCTTAGAGTCCCCCAAACTAACCTTTAGCGAAAGTGTGAGGCTCAGAGCTGGTGTTAACAAAATCTCCCTTTTAAGTGTTGCAGTTGGGCTTCCGAATGTTGGTCCACATTTTGAAAGATGGAATGCTGGTGTTCTTGGTCCAATAACATTAAGTGGTCTCAATGAGGGGAGAAGAGACTTAACTTGGCAGAAGTGGTCATACAAGGTTGGTCTTAAAGGTGAAGCCTTGAATCTACATTCTCTTAGTGGAAGTTCCTCTGTTGAGTGGCTTCAGGGGTATTTAGTTTCTAAAAGACAGCCATTGACATGGTACAAAACTACCTTTGATGCCCCAGTTGGGGTTGCACCATTGGCTTTAGACATGGCCAGCATGGGGAAAGGTCAAGTGTGGATAAATGGACAAAGTCTGGGTCGCTACTGGCCTGCTTACAAAGCATCTGGTTCCTGTGGTTATTGTAACTATGCAGGGACTTACAATGAGAAAAAATGTGCAAGTAACTGTGGCGAGGCTTCTCAACGATGGTACCATGTTCCTCATTCTTGGCTGAAGCCAACCGGAAATTTATTGGTTGTGTTCGAGGAACTGGGCGGGGATCCGAACGGGATCTTTTTGGTTAGAAGGGATATTGACAGTGTATGTGCTGATATCTATGAGTGGCAGCCAAATCTTGTTAGTTATGAGATGCAAGCTTCTGGCAAAGTCAGAAGTCCTGTGAGACCAAAGGCACATTTGTCATGTGGTCCTGGACAAAAAATCTCATCAATCAAGTTTGCTAGCTTTGGCACTCCAGTAGGATCTTGTGGAAGCTACCGGGAAGGAAGTTGTCATGCTCACAAGTCATATGATGCTTTCCAGAAGAATTGTGTTGGGCAAAGCTGGTGCACAGTGACAGTGGCTCCTGAAATTTTTGGAGGAGATCCATGTCCAAGTGTCATGAAAAAGCTCTCAGTGGAGGCCATTTGCACCTGA 2535 0.4375 MSFNKLIVWNVPLLLVVVVAWSLIGHASASVSYDHKAITINGQRKILLSGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSRGKYYFGGNYDLVRFIKLVQQAGLYVNLRIGPYVCAEWNFGGFPVWLKYIPGINFRTDNGPFKFEMEKFTKKIVDMMKAERLFESQGGPIIISQIENEYGPLEYEVGAPGRAYTQWAAHMAVGLGTGVPWIMCKQDDAPDPIVNTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGAVPHRPAEDLAFSIARFIQKGGSYVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLARQPKWGHLKDLHRAIKLCEPALISGDPTVQRLGNYEEAHVFRSKSGACAAFLANYNPQSYATVAFGNQHYNLPPWSISILPNCKHTVYNTARVGSQSTTMKMSRVPIHGGLSWKAFNEETTTTDDSSFTVSGLLEQINATRDLSDYLWYSTDVVINPNEEFLRNGKNPFLTVLSAGHALHVFINNQLSGTAYGSLESPKLTFSESVRLRAGVNKISLLSVAVGLPNVGPHFERWNAGVLGPITLSGLNEGRRDLTWQKWSYKVGLKGEALNLHSLSGSSSVEWLQGYLVSKRQPLTWYKTTFDAPVGVAPLALDMASMGKGQVWINGQSLGRYWPAYKASGSCGYCNYAGTYNEKKCASNCGEASQRWYHVPHSWLKPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLVSYEMQASGKVRSPVRPKAHLSCGPGQKISSIKFASFGTPVGSCGSYREGSCHAHKSYDAFQKNCVGQSWCTVTVAPEIFGGDPCPSVMKKLSVEAICT* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1446 844 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 176 188 IPR019801 GO:0004553|GO:0005975
Pvu10g1446 844 SUPERFAMILY Galactose-binding domain-like 405 576 IPR008979 -
Pvu10g1446 844 Pfam Glycosyl hydrolases family 35 38 342 IPR031330 -
Pvu10g1446 844 SUPERFAMILY Galactose-binding domain-like 585 748 IPR008979 -
Pvu10g1446 844 Gene3D - 755 844 IPR043159 -
Pvu10g1446 844 Gene3D - 597 735 - -
Pvu10g1446 844 PRINTS Glycosyl hydrolase family 35 signature 41 58 IPR001944 GO:0004553|GO:0005975
Pvu10g1446 844 PRINTS Glycosyl hydrolase family 35 signature 62 80 IPR001944 GO:0004553|GO:0005975
Pvu10g1446 844 PRINTS Glycosyl hydrolase family 35 signature 117 136 IPR001944 GO:0004553|GO:0005975
Pvu10g1446 844 PRINTS Glycosyl hydrolase family 35 signature 174 189 IPR001944 GO:0004553|GO:0005975
Pvu10g1446 844 PRINTS Glycosyl hydrolase family 35 signature 253 268 IPR001944 GO:0004553|GO:0005975
Pvu10g1446 844 PRINTS Glycosyl hydrolase family 35 signature 290 305 IPR001944 GO:0004553|GO:0005975
Pvu10g1446 844 PRINTS Glycosyl hydrolase family 35 signature 310 326 IPR001944 GO:0004553|GO:0005975
Pvu10g1446 844 PRINTS Glycosyl hydrolase family 35 signature 621 635 IPR001944 GO:0004553|GO:0005975
Pvu10g1446 844 PRINTS Glycosyl hydrolase family 35 signature 648 664 IPR001944 GO:0004553|GO:0005975
Pvu10g1446 844 Pfam Beta-sandwich domain in beta galactosidase 350 421 IPR041392 -
Pvu10g1446 844 PANTHER BETA-GALACTOSIDASE 8 838 - -
Pvu10g1446 844 Pfam Galactose binding lectin domain 766 843 IPR000922 GO:0030246
Pvu10g1446 844 Gene3D Glycosidases 27 347 - -
Pvu10g1446 844 SUPERFAMILY (Trans)glycosidases 30 347 IPR017853 -
Pvu10g1446 844 ProSiteProfiles SUEL-type lectin domain profile. 758 844 IPR000922 GO:0030246
Pvu10g1446 844 PANTHER BETA-GALACTOSIDASE RELATED 8 838 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1446 Pvu-Chr10 41137349 41143470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1446 23 843 Glycoside Hydrolase AT3G13750 80.146 0.0 1415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1446 - - gmx:100785688 1693.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1446 10 41137349 41143470 Pvu10g1446 10 41137349 41143470 ECH
Pvu5g1648 5 38540635 38546658 Pvu10g1446 10 41137349 41143470 PCT