Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1443 ATGATGCACACACAAACCAAGGCCAATGAGAGCAAGCCACTTATAGGTTGGGAAGAAGCAGCTTCTTCAGAGAGAGAGAAAGATTGTGTTTTTTCTGGGCCCTCAGATTCCATGGCTTCAGTTGGTGCACTCAGATTCTTGTTCTGCCTTGCTCTATGCCTCTGCAACTTTCTACCCTCTTGTCAAGGTAGTAGTCACTGGCATGAAAATAAATACCCTTTTATCAGAAATGCAAGCTCCTTCTCATCACCATCAATTTCAACTACCACCTCCAATAATGTCTATGACTACATAATATTGGGAGGTGGCACAGCAGGGTGTCCTCTGGCTGCAACTCTCTCTCAGAATTACAGTGTTCTGGTGCTTGAAAGAGGTGGTGTTCCCTTCACCAACCCCAATGTTTCATTTCTTGAGAACTTCCACATTACCTTGGCAGACATTTCTCCAACTTCAGCTTCTCAATACTTCATTTCAACTGATGGAGTCTACAATTCAAGGGCCAGGGTCCTAGGAGGTGGCAGTTCTATCAATGCTGGTTTCTACACTAGAGCAAATCCAAGTTTTATTGAGAAGGTGGGATGGGATGCCAAGCTAGTAAATCAGTCATATCCATGGGTTGAAAAACAAATTGTTCACCGTCCAACGTTTTCACCTTATCAAAGAGCAGTGAGGGATAGTCTTCTAGACTCTGGTGTGTCACCTTTTAATGGCTTCACCTATGATCATCTCTACGGAACAAAAGTTGGTGGAACCATTTTTGACAGATTTGGCCGCCGTCACACGGCTGCTGAACTGCTTGCTTCAGGCAACCATGAAAAGCTTACTGTTTTGGTCTATGCCACTGTTCAAAAGATTGTGTTTGATACAAAAGGAAAGAAACCAAAAGCTGTAGGGGTTATTTTCCAAGATGAAAATGGGAAACAGCATGAAGCTATTCTGGCAAATGATAGGCATAGTGAAGTTATAATGTCTACTGGGGCAATTGGGACTCCTCAGTTGCTAATGCTTAGTGGAATTGGACCAAAAGAAGAACTCCAGAAGTTGAACATCCCAGTGGTCCTTGACAACCAGTTTGTTGGGAAAGGAATGGTAGACAATCCCATGAACACAATGTTTGTTCCTTCTAAAAGACCAGTTCATCAGTCACTCATAGAAACTGTTGGGATCACCAAGATGGGTGTGTACATTGAGGCTAGCAGTGGGTTTAGTCAGTCTAATGATAGCATTCATTGCCACCATGGTATCATGTCAGCCGAGATTGGGCAGTTGTCTACAATCCCTCCTAAGCAAAGATCACCAGAAGCTGTTCAAGAATTTGTCAAGAACAAGAGAGACCTACCGATTGAAGCATTTAAGGGAGGCTTTATTTTGTCAAAAGTTGCCAATCCTTGGTCAGTTGGTGAGCTCAAGCTGGTCAACACCAATGTGAAAGACAACCCTGCTGTTACCTTCAACTACTTCAGTCATCCATATGATCTTGAGCGCTGCGTCAAGGGGATCCGTTTGGCCATTAAGGTTGTCCAGTCAAAACATTTCACAAACTACACTATGTGTGACAAAAAAACAGCAGAGGAACTGCTCAACCTCACTGTGAAGGCTAATGTCAACTTCATACCCAAGCATGTGAAAGACACAAAGTCACTAAAGCAGTTTTGCAAAGACACTGTGATCACAATTTGGCACTACCATGGAGGGTGCCATGTGGGGAAGGTAGTCAACCCTGATTACATGGTCCTTGGTGTTGACAGACTCCGTGTGGTAGATGGCTCAACATTTGATGAATCACCAGGAACAAATCCTCAAGCCACTGTTATGATGATGGGCAGGTACATGGGACTGAAGATTTTGAGAGACAGGTTGGGGAAATTGGCAGGTATATGA 1881 0.437 MMHTQTKANESKPLIGWEEAASSEREKDCVFSGPSDSMASVGALRFLFCLALCLCNFLPSCQGSSHWHENKYPFIRNASSFSSPSISTTTSNNVYDYIILGGGTAGCPLAATLSQNYSVLVLERGGVPFTNPNVSFLENFHITLADISPTSASQYFISTDGVYNSRARVLGGGSSINAGFYTRANPSFIEKVGWDAKLVNQSYPWVEKQIVHRPTFSPYQRAVRDSLLDSGVSPFNGFTYDHLYGTKVGGTIFDRFGRRHTAAELLASGNHEKLTVLVYATVQKIVFDTKGKKPKAVGVIFQDENGKQHEAILANDRHSEVIMSTGAIGTPQLLMLSGIGPKEELQKLNIPVVLDNQFVGKGMVDNPMNTMFVPSKRPVHQSLIETVGITKMGVYIEASSGFSQSNDSIHCHHGIMSAEIGQLSTIPPKQRSPEAVQEFVKNKRDLPIEAFKGGFILSKVANPWSVGELKLVNTNVKDNPAVTFNYFSHPYDLERCVKGIRLAIKVVQSKHFTNYTMCDKKTAEELLNLTVKANVNFIPKHVKDTKSLKQFCKDTVITIWHYHGGCHVGKVVNPDYMVLGVDRLRVVDGSTFDESPGTNPQATVMMMGRYMGLKILRDRLGKLAGI* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1443 626 SUPERFAMILY FAD/NAD(P)-binding domain 87 618 IPR036188 -
Pvu10g1443 626 PIRSF Alcohol_oxidase 75 625 IPR012132 GO:0050660
Pvu10g1443 626 ProSitePatterns GMC oxidoreductases signature 1. 167 190 IPR000172 GO:0016614|GO:0050660
Pvu10g1443 626 SUPERFAMILY FAD-linked reductases, C-terminal domain 363 565 - -
Pvu10g1443 626 Pfam GMC oxidoreductase 463 609 IPR007867 GO:0016614
Pvu10g1443 626 PANTHER OSJNBA0019K04.7 PROTEIN 39 626 - -
Pvu10g1443 626 Gene3D - 212 558 - -
Pvu10g1443 626 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 39 626 - -
Pvu10g1443 626 Pfam GMC oxidoreductase 95 367 IPR000172 GO:0016614|GO:0050660
Pvu10g1443 626 ProSitePatterns GMC oxidoreductases signature 2. 326 340 IPR000172 GO:0016614|GO:0050660
Pvu10g1443 626 Gene3D - 95 608 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1443 Pvu-Chr10 41096426 41103291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1443 95 619 Miscellaneous Gene Families AT5G51950 53.484 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1443 K15403 - gmx:100788704 1083.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1642 5 38493986 38501455 Pvu10g1443 10 41096426 41103291 PCT