Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1410 ATGCTGGGTGGGATCCTGAACAAGAAACATAAGATAAAGGGGACTGTGGTGTTGATGCCCAAGAATGTCTTGGACTTCAACGCCATCACCTCCATTCCTGACGGCGGCATTGGCGGAGCAGTGGGTGGTATCGTCGGCGGCGTCGCCAATGTAATTGGCGGAGTAGTGGATGCTGCCACCGCCTTCTTAGGACGAAACGTTTCCCTGCAATTGATCAGTGCTACTCAGACTCATGGTGAAAAAGGAAAAGTTGGAAAAGAAGAATATCTGAATAGTCATCTTCCAACCTTACCAACACTGGGAGCAAGACAAGACGCATTCAGTATTTACTTTGAATGGGATGTTAATTTTGGAATTCCAGGAGCATTTTACATCAGAAACTTTAAGACTGATGAGTTTTTCCTAGTCAGTCTAACTCTTGAAGACATTCCAAACCATGGAACCATTCACTTTGTCTGCAACTCATGGACATATCTTCCAAGTGCAACACCAGCTGCACTAGTTAAGTACAGAGAAGAAGAATTGGAGACTTTAAGAGGAGATGGAACAGGGAAACGCAGGGAATTTGAAAGAGTCTATGACTATGATGTGTATAATGATTTGGGCAACCCAGATGGTGGTGATTCTCGTCCTATCCTTGGTGGCTCTAGCAACTATTCATACCCTCGCAGGGTTAGAACTGGTAGAGACAGAACCAAGAAAGATCCCAAAAGTGAGACACCAGGCGAAGTTTATGTTCCAAGAGATGAAAATTTTGGTCATTTGAAGTCATCGGATTTTCTTGTGTATGCACTCAAATCCTTATCTCAGAGTGTGATACCTTTGTTAAAGTCTGCAATTTTTGAATTAAAGGTCACATCAAGTGAGTTTAAGAGCTTCGACGATGTGCGTAGTTTATATGAGGGTGGAATTAAGTTGCCAACAGATATATTGAGCCAAATTAGTCCCTTACCAGCCCTTAAGGAAATCTTCCGCACTGATGGTGAAAATACCCTTCAATTTCCACCACCTCATGTAATCAGAGTTAGCAAGTCTGCATGGATGACTGATGATGAATTTGCAAGAGAGATGATTGCTGGTGTAAATCCTAATGTAATTCGTCGTCTGCAAGAATTTCCACCAAAAAGCACACTTGATCCCACAGTCTATGGTGATCACACTAGTACCATCACAAAAGAACAGTTGGAGATTAACATGGATGGTGTCACATTAGAAGAGGCACTTGGTACAAACAGATTGTTCATACTAGATTACCATGATGCATTCATCCCTTACTTGAGGATGATAAACGACCTACCAACAGCAAAAGCTTATGCTACAAGGACAATCGTATTCCTGAAACATGATGGATCTTTGAAGCCACTTGTTATCGAATTAAGCAAGCCACATCCTGGTGGAGACAATTTAGGTGCTGTGAGTAAAGCCCTGCTGCCTGCAACAGAAGGTGTTGAAAGTACAATTTGGTTGTTGGCCAAAGCTCATGTAATTGTGAATGACTCTGGCTATCATCAACTCATAAGTCATTGGCTATATACTCATGCTGTGATAGAGCCATTTTCCATAGCAACAAACAGACATCTCAGTGTGCTTCATCCCATTTATAAACTTCTCTATCCTCACTACCGTGACACCATAAATATCAATGGCCTTGCTAGGAAATCCCTTATCAATGCAGGTGGAATTATTGAGCAAGCATTTTTACCTGGAAAGTACTCTATGGAGATTTCCTCAGTTGTTTACAAGAATTGGGTTTTCACAGACCAAGCATTACCAGCTGATCTCCTCAAGAGGGGATTAGCAGTTGAGGATCCCTCTGCTCCTCATGGCCTTCGTCTTGTGATAGAGGACTACCCTTATGCTGCTGATGGACTAGAAATATGGGATGCTATTAAGACATGGGTCAAAGATTATGTCTCCTTATATTACCCTACAGATGCATCACTAAAACAAGATACTGAACTACAAGCTTGGTGGAAGGAAGTTGTGGAAAAGGGTCATGGTGACTTAAAAGATAAGCCTTGGTGGCCTAAAATGCAAACTATTGAAGATCTCATTACATCTTGCTCTATTATCATATGGATAGCTTCTGCTCTTCATGCTGCTGTTAATTTTGGACAATATCCTTATGGAGGCTATATTGTGAACCGTCCAACTCTCAGCAGAAGGTTTATCCCAGAACCAGGAACTAAAGAATATGATGAGATGGTGAAGGATCCCCAAAAGGCTTATTTGCAAACAATCACACCTAAGTATGAGACCATTATTGACATTGCAGTGATAGAGATATTGTCAAGGCATGCTTCTGATGAGATCTACCTTTGGGAGAGGGATAATCCAAATTGGACAACCGATTCAAAGGCAATACAAGCTTTAAAAAAGTTTGGAAGCAAACTGACAGAAATTGAAGGAAGGATCACTGCAAGGAACAGTGATCCAAGTTTGAAAAGCCGACATTCGCCAGTTGACTTGCCATACACCTTACTCCTTCGTTCCAGTGAGGAAGGGTTGACTTTCAGAGGAATTCCCAACAGTATCTCTATCTAA 2544 0.4171 MLGGILNKKHKIKGTVVLMPKNVLDFNAITSIPDGGIGGAVGGIVGGVANVIGGVVDAATAFLGRNVSLQLISATQTHGEKGKVGKEEYLNSHLPTLPTLGARQDAFSIYFEWDVNFGIPGAFYIRNFKTDEFFLVSLTLEDIPNHGTIHFVCNSWTYLPSATPAALVKYREEELETLRGDGTGKRREFERVYDYDVYNDLGNPDGGDSRPILGGSSNYSYPRRVRTGRDRTKKDPKSETPGEVYVPRDENFGHLKSSDFLVYALKSLSQSVIPLLKSAIFELKVTSSEFKSFDDVRSLYEGGIKLPTDILSQISPLPALKEIFRTDGENTLQFPPPHVIRVSKSAWMTDDEFAREMIAGVNPNVIRRLQEFPPKSTLDPTVYGDHTSTITKEQLEINMDGVTLEEALGTNRLFILDYHDAFIPYLRMINDLPTAKAYATRTIVFLKHDGSLKPLVIELSKPHPGGDNLGAVSKALLPATEGVESTIWLLAKAHVIVNDSGYHQLISHWLYTHAVIEPFSIATNRHLSVLHPIYKLLYPHYRDTININGLARKSLINAGGIIEQAFLPGKYSMEISSVVYKNWVFTDQALPADLLKRGLAVEDPSAPHGLRLVIEDYPYAADGLEIWDAIKTWVKDYVSLYYPTDASLKQDTELQAWWKEVVEKGHGDLKDKPWWPKMQTIEDLITSCSIIIWIASALHAAVNFGQYPYGGYIVNRPTLSRRFIPEPGTKEYDEMVKDPQKAYLQTITPKYETIIDIAVIEILSRHASDEIYLWERDNPNWTTDSKAIQALKKFGSKLTEIEGRITARNSDPSLKSRHSPVDLPYTLLLRSSEEGLTFRGIPNSISI* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1410 847 SMART LH2_4 10 172 IPR001024 GO:0005515
Pvu10g1410 847 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 4 847 - -
Pvu10g1410 847 Gene3D - 256 344 IPR027433 -
Pvu10g1410 847 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 157 847 IPR013819 GO:0016702|GO:0046872
Pvu10g1410 847 Gene3D - 481 846 - -
Pvu10g1410 847 MobiDBLite consensus disorder prediction 224 246 - -
Pvu10g1410 847 ProSiteProfiles PLAT domain profile. 44 171 IPR001024 GO:0005515
Pvu10g1410 847 SUPERFAMILY Lipoxigenase 159 847 IPR036226 -
Pvu10g1410 847 Pfam PLAT/LH2 domain 81 158 IPR001024 GO:0005515
Pvu10g1410 847 PRINTS Lipoxygenase signature 485 502 IPR013819 GO:0016702|GO:0046872
Pvu10g1410 847 PRINTS Lipoxygenase signature 503 520 IPR013819 GO:0016702|GO:0046872
Pvu10g1410 847 PRINTS Lipoxygenase signature 523 543 IPR013819 GO:0016702|GO:0046872
Pvu10g1410 847 Gene3D - 164 255 - -
Pvu10g1410 847 Pfam Lipoxygenase 167 829 IPR013819 GO:0016702|GO:0046872
Pvu10g1410 847 Gene3D - 345 480 - -
Pvu10g1410 847 PANTHER LIPOXYGENASE 4 847 IPR000907 GO:0016702|GO:0046872
Pvu10g1410 847 Gene3D PLAT/LH2 domain 1 163 - -
Pvu10g1410 847 PRINTS Plant lipoxygenase signature 150 171 IPR001246 GO:0016491
Pvu10g1410 847 PRINTS Plant lipoxygenase signature 189 205 IPR001246 GO:0016491
Pvu10g1410 847 PRINTS Plant lipoxygenase signature 220 239 IPR001246 GO:0016491
Pvu10g1410 847 PRINTS Plant lipoxygenase signature 287 308 IPR001246 GO:0016491
Pvu10g1410 847 PRINTS Plant lipoxygenase signature 332 348 IPR001246 GO:0016491
Pvu10g1410 847 PRINTS Plant lipoxygenase signature 371 390 IPR001246 GO:0016491
Pvu10g1410 847 PRINTS Plant lipoxygenase signature 438 462 IPR001246 GO:0016491
Pvu10g1410 847 PRINTS Plant lipoxygenase signature 760 774 IPR001246 GO:0016491
Pvu10g1410 847 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 10 160 IPR036392 GO:0005515
Pvu10g1410 847 ProSitePatterns Lipoxygenases iron-binding region signature 2. 530 540 IPR020834 GO:0016702|GO:0046872
Pvu10g1410 847 MobiDBLite consensus disorder prediction 202 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1410 Pvu-Chr10 40827600 40832928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1410 3 847 Acyl Lipid Metabolism Gene Families AT1G55020 55.251 0.0 958
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1410 K15718 - gmx:547856 1412.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1616 5 38262821 38265859 Pvu10g1410 10 40827600 40832928 PCT