Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1385 ATGGAATCTGCACTTAATTATAACATAATTCTCCTGGTTATGCAACACAAAGATCACTCCGAATTATCCCAGTCAAGAAGTGGTATGGATTTATGTCGTTCTGGTTCTAATGATCATGCTAAGCAGTTAGCATCTGAACACCCTGCCCAGAGTTGCTCATTTTCAGATGGTGAAAGCAGGATTCAGGAGAACTCAGCTAATAACCTACATGGAGCCAATGATAATACTGTGGAAGAAAATTGGATACAAGCTCAGGATGTCCAACTGTCAAAATCTCAGGATTTACGGTCATCACTGGAGTCTAAGAAAGATGGTTCTGATGAAGGGGGGTTATCTTCTAATCATATTTTATTGAAGACTCCTGAAGAAAATGTGTCGGTTGGGGAAACAAAGTCTGTAATTGCACGTGGAAGACTAGGTACATCAACCTCTGGTCCTGGTCTATCACCGAGTTCTTCGGTTGGTTCCCTGTCTTCGGAGAAGTCAACTCTGAATCCCTATGCCAAGGAGTTCAAACTCAACCCTAATGCAAAGAGTTTTATGCCATCCCAAGCACATGCTAGGCCCCGCTCCCCAGTGTCTGATGGTTCCTTCTATTACCCTGCTACTGTATCTACCGTACCAAATATGCCAGCCATGCCCATGGGTATTGGAGTTGGAACTACTTTTGCAGGGCCGCAGCCTGTCATGTATAATCCACAAGTGGCACAAATGCCATCCCAACCATATTTTCATCCAAATGGACCACAGTATGGACAACTTATGGGTCATCCTAGGCAAGTTTTATATGTGCCAAGTTACCAACCTGAGATGCCGTATAAGGGACGGGATTATTGA 837 0.4385 MESALNYNIILLVMQHKDHSELSQSRSGMDLCRSGSNDHAKQLASEHPAQSCSFSDGESRIQENSANNLHGANDNTVEENWIQAQDVQLSKSQDLRSSLESKKDGSDEGGLSSNHILLKTPEENVSVGETKSVIARGRLGTSTSGPGLSPSSSVGSLSSEKSTLNPYAKEFKLNPNAKSFMPSQAHARPRSPVSDGSFYYPATVSTVPNMPAMPMGIGVGTTFAGPQPVMYNPQVAQMPSQPYFHPNGPQYGQLMGHPRQVLYVPSYQPEMPYKGRDY* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1385 278 MobiDBLite consensus disorder prediction 136 161 - -
Pvu10g1385 278 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 3 19 121 - -
Pvu10g1385 278 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 3 141 276 - -
Pvu10g1385 278 MobiDBLite consensus disorder prediction 88 161 - -
Pvu10g1385 278 PANTHER ATAXIN 2-RELATED 141 276 IPR045117 GO:0003723
Pvu10g1385 278 PANTHER ATAXIN 2-RELATED 19 121 IPR045117 GO:0003723
Pvu10g1385 278 MobiDBLite consensus disorder prediction 25 60 - -
Pvu10g1385 278 MobiDBLite consensus disorder prediction 24 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1385 Pvu-Chr10 40506570 40509450 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1385 - - pvu:PHAVU_010G133200g 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1385 10 40506570 40509450 Pvu10g1385 10 40506570 40509450 ECH
Pvu5g1607 5 38209129 38216672 Pvu10g1385 10 40506570 40509450 PCT