Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0718 ATGGCCACCCTCAACTCTGCGTGCGTCGTTGCCGTGCTGTGCTTGGTGGTGCTGACGGCACCCACTGCACATGCCGCCATCTCCTGCGGCCAGGTCACAAGTTCCCTGGCTTCATGCATCCCTTTCCTCACGAAAGGTGGGCCGGTGCCAGCGTCATGCTGCTCCGGAGTGAGGTCCCTCAACGCCGCCGCAAAGACCACCCCAGACCGCCAGGCGGTCTGCAACTGCCTGAAATCCGCCGCCGGTGCCATCCCTGGATTCAATGCTAACAACGCAGGCATACTCCCGGGCAAGTGTGGCGTCAGCATCCCCTACAAGATCAGTACCTCCACCAACTGCGCTACTATCAAGTTTTGA 357 0.6078 MATLNSACVVAVLCLVVLTAPTAHAAISCGQVTSSLASCIPFLTKGGPVPASCCSGVRSLNAAAKTTPDRQAVCNCLKSAAGAIPGFNANNAGILPGKCGVSIPYKISTSTNCATIKF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0718 118 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Pvu10g0718 118 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Pvu10g0718 118 PRINTS Plant phospholipid transfer protein signature 69 84 IPR000528 GO:0006869|GO:0008289
Pvu10g0718 118 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Pvu10g0718 118 PRINTS Plant phospholipid transfer protein signature 104 115 IPR000528 GO:0006869|GO:0008289
Pvu10g0718 118 Pfam Protease inhibitor/seed storage/LTP family 29 113 IPR016140 -
Pvu10g0718 118 CDD nsLTP1 27 113 - -
Pvu10g0718 118 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 115 - -
Pvu10g0718 118 Gene3D - 26 117 IPR036312 -
Pvu10g0718 118 SMART aai_6 29 113 IPR016140 -
Pvu10g0718 118 ProSitePatterns Plant lipid transfer proteins signature. 95 116 IPR000528 GO:0006869|GO:0008289
Pvu10g0718 118 PANTHER - 1 115 IPR000528 GO:0006869|GO:0008289
Pvu10g0718 118 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 115 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0718 Pvu-Chr10 17454685 17456340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0718 8 117 Acyl Lipid Metabolism Gene Families AT5G59320 57.273 5.02e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0718 - - gmx:100306510 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0718 10 17454685 17456340 Pvu8g0974 8 9851450 9852990 PCT