Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0692 ATGGCCAGTGTGAAGTTTGCATGCGTGGTTGTGTTGTGCATGGTGGTGGTGGGTGCACACACTGCCCAGGGGATGACCTGTGGGCAAGTTCAGAGTAACCTAGTACCGTGCGTAACATTCCTTCAGAACGGTGGGTTTGTTCCCGCAGGATGCTGCAACGGGGTGAGGAATATCATGAACAGTGCCAGGAGCACTGCTGATCGCCGTGGCATCTGTAACTGCTTGAAGACTGCTGCTGGGGCTGTTCGTGGGCTCAATCCCAATAATGCTCAGGCTCTCCCCGGAAAGTGTGGGGTAAACATACCCTACAAGATCAGCACCTCCACCAACTGTGCCAGCATCAATTGA 348 0.5402 MASVKFACVVVLCMVVVGAHTAQGMTCGQVQSNLVPCVTFLQNGGFVPAGCCNGVRNIMNSARSTADRRGICNCLKTAAGAVRGLNPNNAQALPGKCGVNIPYKISTSTNCASIN* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0692 115 CDD nsLTP1 26 111 - -
Pvu10g0692 115 ProSitePatterns Plant lipid transfer proteins signature. 93 114 IPR000528 GO:0006869|GO:0008289
Pvu10g0692 115 SMART aai_6 27 111 IPR016140 -
Pvu10g0692 115 PANTHER - 1 113 IPR000528 GO:0006869|GO:0008289
Pvu10g0692 115 PRINTS Plant phospholipid transfer protein signature 26 42 IPR000528 GO:0006869|GO:0008289
Pvu10g0692 115 PRINTS Plant phospholipid transfer protein signature 46 60 IPR000528 GO:0006869|GO:0008289
Pvu10g0692 115 PRINTS Plant phospholipid transfer protein signature 67 82 IPR000528 GO:0006869|GO:0008289
Pvu10g0692 115 PRINTS Plant phospholipid transfer protein signature 84 101 IPR000528 GO:0006869|GO:0008289
Pvu10g0692 115 PRINTS Plant phospholipid transfer protein signature 102 113 IPR000528 GO:0006869|GO:0008289
Pvu10g0692 115 Pfam Protease inhibitor/seed storage/LTP family 27 111 IPR016140 -
Pvu10g0692 115 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 113 - -
Pvu10g0692 115 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 113 IPR036312 -
Pvu10g0692 115 Gene3D - 24 115 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0692 Pvu-Chr10 15124292 15126129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0692 4 114 Acyl Lipid Metabolism Gene Families AT2G38540 46.903 9.84e-32 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0692 - - gmx:100776812 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0886 8 8658472 8659588 Pvu10g0692 10 15124292 15126129 PCT