Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02433 ATGGCTCACTGCTCTAACAAGGATAATGATCCAAGTGCATCTCAATTAAGCTGGTGGTATGTGGATATATCTTATCAAGAACTCAAAAAGGGAAGTTACAAAGTGAAGAGCTCAGATGAAACTTTCATTTGTCCGTACTGTCCTGAGAGAAAACAGGATTATAAGTACAGGGAACTCCTTAATCATGCTTCTGGGGTGGGTCGGAGTAGTTCAGAAAAGAGATCTGCAAAAGAGAAGGCTAATCATCTGGCTTTAGTGAAATATTTGGAAAAGGATCTCGCGTATATGGATGGCCCATCAAAACCTTTAGATAAAGGTGCCAAATTATTAAGCCCAGGAGAAACCATAATGCCTCACTGTTCTAACAAGGATACTGATACAAGTGCTTCTCAAATTAGTTGGTGGTATGTAGATACATCTTACGAAGAACTCAAAAAGGGAAGCCACAATGTGAAAACCTCAGACGTGACTTTCATCTGTCCATACTGCCCTAGGAGAAAACAGGATTATTTGTACAGGGAACTCCTAGAACATGCTTATATGGTGGGTCGGAGTAGTTCTGAAAAGAGAAGTGCCAGAGAGAGGGCCAATCATCTCGCTTTAGTGAAATATTTGGAAAATGATCTTATTATTATGGATGGCCTGTCAGAACACGTAGATAAAGGTACCAAATTAAGCCTAGGGCAAACTGTAATGGCTCAGAGCTCCAACAAGGAGACTGGTACGAGTGCATCTCCAATAAATTGGTGGTATGTAGATAAATTTTACAAAGAACTCAAAAAGGGAAATCAAATTGTGCAAACCTCAGATCAGACTTTCTCTTGTCCATACTGCCCTAAAAAAAGAAAACAGGATTATGTGTACAGGGAACTTCTCGAGCATGCTTCTGGGGTGGGTCAGAGTAGTTCTGAAAAGAGAAGTGTCAAAGAGAAGGCCACTCATCTGGCTTTAGTGAAATATTTGAAAAATGATCTCAGTGATCCATCAAAATCTGTGAATGAAGGTAACCCCCCAGTTAACAGGGTGGATCAGAGTAGTTCACAAGAGAGAAGTGTCAGAGAAGACGCTACCCATCTGCCTTCAGCGAAATACTTGAAAAAGGATCTCACAAATGTGAGTGGTCCATCATCAAAACCTGTAAATGAAGGAACCATATTAGTAAGCCCAGGAGAAACAGTAATTGGTTGCTGCTCTGGCAAAGATAGCAATATAAGTTCATCTCAAATTGGGCGGTATGCAGATAAATTTTATGAAGAACTCAAAAAGGGAAGACACAATGTGAAAACCTCAGATGAGACTTTCAGGTGCCCGTACTGCCCTAATAAAAAGATAAACAGGGATTATGTGTACAGGGAAATCCTTGAACATGCTTCTGGGGTGGGTCAGAGTAGATCTCAAAAAAGAAGTTTCATCGAAAAGGCCAATCATCTGGCTTTAGTAAAATATTTGAAAAAGGATCTTATGAATGTGGGTGCTCCATGTCCATCAAAACCTATGGATCAAGGCACCAAAACAATAAGCCCAGGAGAAACTGTAATGGGTCACTACTCTCGTAAAGACAGTGATATAAGGGCATCTCAAATAAATGGGTGGTATGTACATAAATCCTATGAAGCACTCAAAACGGGAAGTCACAATGTGAAAACCTCAGAAATGACTTTCTCTTGTCCATACTGCCCCAATAAGAAGAGAAAACGGGATTATGTGTACAGGGAAATCCTTGAACATGCTTCCGGGGTGGGTCAGAGTAGCTCACAAAAGAGAAGTGCCATTGAAAAGGCTAATCATCTGGCTTTAATGAAATATTTGGAAAAGGATCTTATGAATGTGGATGGTCCTCCAAAAACTGCAGATGAAGGCAGTCCTCCTTTCAATTCTGAGAAGCAGTTTGTGTGGCCATGGACTGGGATCGTGGTTAATATTCCTACTAGACAGACAGAAGATGGACGTTGTGTTGGGGAAAGTGGTTCCAAGCTGAGGGATGAATACCGAAGCAGGGGATTTAATCCACGTAGAGTCCGCATTCTTTCAAATTTCTGGGGCCACTCTGGAACTGCAGTTGTGGAATTCAATAAAAATTGGACAGGCTTAGATAACGCTTTAGCATTTGAAAGAGCATATGAATTAGATCATCATGGGAAAAAAGACTGGTTTGCTAATACTGAGCAGAAGTCTGGTATTTATGCGTGGATTGCTCGAGCTGATGACTACAAGATGAACAATACCATTGGGGAACAACTGCAGAAGATGGGGGATATCAAAACAATATCTGAACATATGGAAGAAGAAGCTCGGTTGCAGGATAAACTTGTGTCCAGCTTGAATAATACTCTTCAGGTCAAGAAGAAGCGATTAAAGGAGATGGAAGTAAAATACAATGAGACTTCACGTCGCATGGACATTGTAATGCGGGAAATAGATAAGCTCACTCAAGGTCACAATCAAGAGATGAAGAAAATACAGTCAAGTGCAACTCAACACTTTCAGAATATTTTTAATGGTCATGAAAGGCTCAAGTTGCAACTGGAATCTCAGAAAAGAGAGCTTGAGTTGCGGAGAATTGAACTGGAAAAACGTGAGGCACGTAATGAAAGTGAAAGAAAAAAGTTGGAAGAAGAGATTATGGAGAATGCATTGAAAAATAGCTCTCTTGAAATGGCTGTTCTGGAGCAACAGAAAGCTGGTGAAAATGTTTTGAAACTGGCTTCAGATCAAAAGCGGCAAAAAGAACAACTTAATGCTAAAATCATCCTGCTTGAAAAACAACTGGAAGTGAAACAAAAACTAGAATTGGAGATTCAACAAATGAAAGGAAAATTAAATGTCATGGCACACATGGAAGATGATGGGGACTCAGAAGTTCTGAATAAGGTGGATGCTTTACATAAGGATTTAAGAGAAAAGGAACAGTCACTACGAGACTTGGATTCCCTGAACCAAACACTGATTATTAAAGAGCGTCAGAGCAATGATGAGCTACAGGAAGCTCGAAAAGAATTGATTAATAGCATTAAAGAGATATCTTGTCGTGCTAACATTGGTGTGAAGAGAATGGGGGAGCTCGATATTAGACCATTCCTTGAAGCTATGAAGAAAAAATATAATGATGAGGATGCAGAAGATAGAGCTTCAGAACTGTGTTCATTGTGGGAAGAGTATATAAAGGACCCAGACTGGCATCCATTTAAAATTACCATAATTGAAGGGAAACATCAGGAAATCATAGACGATGAAGATGAAAAGTTGAAAGGACTGAAAAATGAGATGGGTGAAGGAGTCTACAAAGCTGTGGTAACAGCTTTGACAGAGATAAATACATATAATCCAAGTGGGCGGTATATAACCTCTGAATTATGGAATTATGAAGAGGGAAAGAGAGCAACCTTGCACGAAGGAGTAAAATTGTTATTGATGCAATGGAAGCTAACTAAACAGAAAAGGGGGACGATATGA 3453 0.3988 MAHCSNKDNDPSASQLSWWYVDISYQELKKGSYKVKSSDETFICPYCPERKQDYKYRELLNHASGVGRSSSEKRSAKEKANHLALVKYLEKDLAYMDGPSKPLDKGAKLLSPGETIMPHCSNKDTDTSASQISWWYVDTSYEELKKGSHNVKTSDVTFICPYCPRRKQDYLYRELLEHAYMVGRSSSEKRSARERANHLALVKYLENDLIIMDGLSEHVDKGTKLSLGQTVMAQSSNKETGTSASPINWWYVDKFYKELKKGNQIVQTSDQTFSCPYCPKKRKQDYVYRELLEHASGVGQSSSEKRSVKEKATHLALVKYLKNDLSDPSKSVNEGNPPVNRVDQSSSQERSVREDATHLPSAKYLKKDLTNVSGPSSKPVNEGTILVSPGETVIGCCSGKDSNISSSQIGRYADKFYEELKKGRHNVKTSDETFRCPYCPNKKINRDYVYREILEHASGVGQSRSQKRSFIEKANHLALVKYLKKDLMNVGAPCPSKPMDQGTKTISPGETVMGHYSRKDSDIRASQINGWYVHKSYEALKTGSHNVKTSEMTFSCPYCPNKKRKRDYVYREILEHASGVGQSSSQKRSAIEKANHLALMKYLEKDLMNVDGPPKTADEGSPPFNSEKQFVWPWTGIVVNIPTRQTEDGRCVGESGSKLRDEYRSRGFNPRRVRILSNFWGHSGTAVVEFNKNWTGLDNALAFERAYELDHHGKKDWFANTEQKSGIYAWIARADDYKMNNTIGEQLQKMGDIKTISEHMEEEARLQDKLVSSLNNTLQVKKKRLKEMEVKYNETSRRMDIVMREIDKLTQGHNQEMKKIQSSATQHFQNIFNGHERLKLQLESQKRELELRRIELEKREARNESERKKLEEEIMENALKNSSLEMAVLEQQKAGENVLKLASDQKRQKEQLNAKIILLEKQLEVKQKLELEIQQMKGKLNVMAHMEDDGDSEVLNKVDALHKDLREKEQSLRDLDSLNQTLIIKERQSNDELQEARKELINSIKEISCRANIGVKRMGELDIRPFLEAMKKKYNDEDAEDRASELCSLWEEYIKDPDWHPFKITIIEGKHQEIIDDEDEKLKGLKNEMGEGVYKAVVTALTEINTYNPSGRYITSELWNYEEGKRATLHEGVKLLLMQWKLTKQKRGTI 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02433 1150 Coils Coil 958 1010 - -
Pumo9g02433 1150 Coils Coil 902 939 - -
Pumo9g02433 1150 PANTHER RIBONUCLEASE P SUBUNIT P38 515 1148 IPR045177 GO:0080188
Pumo9g02433 1150 MobiDBLite consensus disorder prediction 493 517 - -
Pumo9g02433 1150 Pfam XS domain 627 738 IPR005380 GO:0031047
Pumo9g02433 1150 MobiDBLite consensus disorder prediction 326 346 - -
Pumo9g02433 1150 Pfam XH domain 1016 1146 IPR005379 -
Pumo9g02433 1150 Coils Coil 771 805 - -
Pumo9g02433 1150 Coils Coil 832 892 - -
Pumo9g02433 1150 MobiDBLite consensus disorder prediction 326 360 - -
Pumo9g02433 1150 CDD RRM_like_XS 630 737 IPR005380 GO:0031047
Pumo9g02433 1150 Gene3D XS domain 624 793 IPR038588 -
Pumo9g02433 1150 Pfam XS zinc finger domain 556 599 IPR005381 GO:0031047
Pumo9g02433 1150 Pfam XS zinc finger domain 275 318 IPR005381 GO:0031047
Pumo9g02433 1150 Pfam XS zinc finger domain 44 86 IPR005381 GO:0031047
Pumo9g02433 1150 Pfam XS zinc finger domain 436 480 IPR005381 GO:0031047
Pumo9g02433 1150 Pfam XS zinc finger domain 160 202 IPR005381 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02433 Pumo-Chr9 58592927 58601926 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02433 - - gmx:100790814 2145.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02433 9 58592927 58601926 Pumo9g02433 9 58592927 58601926 ECH
Pumo1g00148 1 2441762 2448537 Pumo9g02433 9 58592927 58601926 PCT