Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00148 ATGGCTCACAGCAGCTCTGATGAGGATACTGATATTAGTGAATCTGAAATTAGTGAGTATGAAGATAAATCCTATGAAGAACTGAAAAGTGGAAGTCAGAATGTGAAAACATCGGATGAGACTTTCACTTGTCCGTACTGCCCTAAAAAGAGAAAACGGGATTATTTATACAAGGAGCTCCTTCAACATGCTTCTGGGGTGGGTCAAAGTAGTTCACAAAAGAGAAAAGCAAGAGACAAGGCTAATCATTTGGCTTTAGTGAAATATTTGGAAAAGGATCTCATGAATGTAGATGTTCCATCAAATGATTCAAAACCGGCAGATGAAAATGATCCTTCTGTTAATTCTAATGAGCAGTTTGTGTGGCCTTGGATTGGAGTTGTAGTTAATATTCCAACTAGACGGACAGAAGATGGACGCTGTGTTGGTGAGAGTGGTTCCAGGCTGAGGGATGAGTACAGAAGCAGGGGTTTCAATCCAGTTCGAGTCAATCCTTTGTGGAATTTCCGGGGTCACTCTGGAACTGCTCTTGTGGAATTCAATAAAAACTGGCCAGGCTTAGATAATGCATTGGCATTTGAAAGAGCATATGAATTAGATCACCATGGGAAAAAAGATTGGTTCGCTAATTCTGGGCCAAAGTCTGGTCTTTATGCATGGGTTGCCCGGGCAGATGACTACAAAATGAACAGTATCTATGGAGAACATCTGCGAAAGATGGGTGATGTCAAAACCATATCCGAGCTTATGGAAGAGGAAGCTCGAAGGCAAGATAAACTTGTCTCTAATTTGACTAACATTATTCAGGTCAAGAATAAGCATTTAAAAGAGATAGAAGTAAGATGCCTTGAGACCACGCACAAAATGAAACTTGCTATGACGGAAAAAGATAGACTCATTCAAGCTTATAATGAAGAGATACAGAAAATACAGTCAAGTGCCAGGGATCACTTCCAAAGGATTTTTACTGATCATGAAAAGCTCAAATTGCAACTGGAATCTCAGAAAAATGAGCTTGAGTTGCGGAAAACTGAACTGGAAAAACGTGAGGCACACAATGAAAGTGAAAGAAAAAAGTTAGCAGAAGAAATTGAGGAGAATGCAACGAAAAATAGCTCTCTTCAGATGGCTGCTTTAGAGCAAAAGAAAGCTGATGAAAATGTTATGAAACTGGCTGAAGATCAAAAGAGGCAAAAAGAACAACTCCATGCTAAAATCATTCAGCTTCAAAAGCAACTTGATATGAAACAAGAGCTGGAGTTGGAGATTCAGCAATTAAAAGGTTCATTAAGTGTGTTGAAGCACATGGAAGATGACGAAGATGCAGAAATTCTGAAGAAGGTAGATACACTACAAAAGGATTTAAGAGACAAGGAGCAGTCACTTCAAGACTTAGATGCATTGAACCAAACGCTAATCATTAAAGAGCGTGAGAGTAATGATGAGCTGCAGGAAGCTCGACAAGCATTGGTTGATGGCATTAAAGAGTTGCAATCTCATGGAAACATTCGTTTGAAGAGAATGGGGGAACTTGATACTAGACCATTCCTTGAAGCAATGAAGCAAAGATATAATGAGGAGGAAGCTGAAGAGAGAGCTTCAGAACTGTGTTCGTTGTGGGAAGAATATCTAAAGGACCCAGATTGGCATCCATTCAAAGTTATCATGGTTGAAGGGAAAGAAAAGGAAATTATTAGAGATGACGATGAAAAGCTGAATGGGTTGAAAAGTGACTTGGGTGAAGGGGCATATAAAGCAGTGGTGGAAGCTTTGTTGGAAATAAATGAACATAATCCTAGTGGGCGATACTTAACCTCAGTATTATGGAACTATAAACAAGGAAGGAGAGCAACTCTGAAAGAAGGAGTACAATTTCTGTTGAATCAATGGAAAGTTCTTAAACGCAAGAGGGGAATGACGTGA 1923 0.3952 MAHSSSDEDTDISESEISEYEDKSYEELKSGSQNVKTSDETFTCPYCPKKRKRDYLYKELLQHASGVGQSSSQKRKARDKANHLALVKYLEKDLMNVDVPSNDSKPADENDPSVNSNEQFVWPWIGVVVNIPTRRTEDGRCVGESGSRLRDEYRSRGFNPVRVNPLWNFRGHSGTALVEFNKNWPGLDNALAFERAYELDHHGKKDWFANSGPKSGLYAWVARADDYKMNSIYGEHLRKMGDVKTISELMEEEARRQDKLVSNLTNIIQVKNKHLKEIEVRCLETTHKMKLAMTEKDRLIQAYNEEIQKIQSSARDHFQRIFTDHEKLKLQLESQKNELELRKTELEKREAHNESERKKLAEEIEENATKNSSLQMAALEQKKADENVMKLAEDQKRQKEQLHAKIIQLQKQLDMKQELELEIQQLKGSLSVLKHMEDDEDAEILKKVDTLQKDLRDKEQSLQDLDALNQTLIIKERESNDELQEARQALVDGIKELQSHGNIRLKRMGELDTRPFLEAMKQRYNEEEAEERASELCSLWEEYLKDPDWHPFKVIMVEGKEKEIIRDDDEKLNGLKSDLGEGAYKAVVEALLEINEHNPSGRYLTSVLWNYKQGRRATLKEGVQFLLNQWKVLKRKRGMT 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00148 640 MobiDBLite consensus disorder prediction 345 370 - -
Pumo1g00148 640 MobiDBLite consensus disorder prediction 1 47 - -
Pumo1g00148 640 CDD RRM_like_XS 120 227 IPR005380 GO:0031047
Pumo1g00148 640 Pfam XS domain 118 228 IPR005380 GO:0031047
Pumo1g00148 640 Pfam XS zinc finger domain 44 87 IPR005381 GO:0031047
Pumo1g00148 640 Coils Coil 322 366 - -
Pumo1g00148 640 Gene3D XS domain 113 283 IPR038588 -
Pumo1g00148 640 MobiDBLite consensus disorder prediction 345 366 - -
Pumo1g00148 640 Coils Coil 392 436 - -
Pumo1g00148 640 Coils Coil 480 500 - -
Pumo1g00148 640 Pfam XH domain 506 636 IPR005379 -
Pumo1g00148 640 PANTHER RIBONUCLEASE P SUBUNIT P38 5 638 IPR045177 GO:0080188
Pumo1g00148 640 Coils Coil 448 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00148 Pumo-Chr1 2441762 2448537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00148 - - gmx:102665742 1182.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00148 1 2441762 2448537 Pumo1g00148 1 2441762 2448537 ECH
Pumo1g00148 1 2441762 2448537 Pumo9g02433 9 58592927 58601926 PCT