Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02429 ATGCCTTTCATTTCCAAAATTCAGCGTCAATCTGATTTCAACCTCTTCGATTCCCACACTCCTATTGTGATAGACAATGGCGCCTCGTATTTTCGCATAGGGTGGGCGGGAGAGTCTGAACCTCGTGTTGTTTTCCGCAACATTGTGCAAAGGCCACGCCATAAAGTAACTGGGGAAACTGTCACTATTGTGGGTGACCATGATCCGGCATTACTGAAATACTTTGACTGCACTCGCTCAGGGCCACGCTCTGCATTCGACAGCAATGTTGTGTACCAGTTTGAAACAATGGAATATATTCTTGATTTTGGATTTGACCGGATGGGTGCAAATGGAACAGAGATTGATCATCCTGTCCTGATCACAGAATGTGTATGCAACCCGGTTCAATCTCGTAGTAAAATGGCAGAACTTCTTTTTGAGACTTATGGAGTTCCATCAATTGCCTTTGGTGTTGATGTGGCATTCAGCTATAAATATAATCAACAACAAGGAGTTTGTGCTAAAGATGGTCTTGCTTTGTGTCCTGGATTCAACACAACCCATGTGATTCCGTTTGTAGATGGGGAGCCTGTTTATGAAGGATGCTGTCGTACTAATATTGGTGGATTCCATGTGACTGATCATTTGAAGCAACTCCTTTCACTTAAATATCCTTATCATTTGACTAGATTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTACATTGCACCAGATTATGTTTCTGAAGCTCGGTTGTTTCAGAAAGGAGCCAAGGAAGCTGAAGAAAAAACCAGATGTTGGCAGCTCCCTTGGGTTCCTCCCCCAACTGAGGAGCCTCCTTCTGAGGAAGAGATTGCAAGAAAGGCAGCAATAAAAGAGAAACAAGGTCAAAGGCTTCGAGAAATGGCTGAGGCAAAGAGGTCTTCTAAAATAAATGAACTGGAAAATGAATTGCATGGTTTAGAGTTTCTTTTGCATCAGCTTGAACAAGTGGAAGAGAGCGAGGTTCCATCTTTCCTGGCAGAAACTGGCTATGGCTCTAGGCAGGAGATAGAATCTGCACGTAATAAAGTTATGCAATCTTTACGGAAAGCAAAAGGTGAACCAAAGAATGAACAAGATGAAACTGAAAAGGTTGATCCTGCCGCTAATGAGAAGTATTCTCTTATTAACATTCCTGATGACATGTTGACTCAAGAACAGCTCATTGAAAAGAAGAAACAGTTGTCACTCAAATCTATGGCTGAAGGGAGGCAGCGATTAAAACAAAAGCGCTATGAAGAGGAATTGGAACGAGAGAGAAAACAACAGCTAGAGGAGGAGAAACGCCTGGAGAACCCAGAGCTTTACTTGGAACAATTGCATGCTAGATACAAAGACTTTTCAGAAAGAGTTGACCAACAAAAGCGACTTAAGACAAACGGAGGCCATTCAAATGGAAATAATCTGTCCGGTGGTGTTGGCCGTGGTGAAAGACTGAATGCTGCTCAGAGAGAACGAATGCGTCTCCTGACAACTGCAGCTTTTGATCGTGGTAAGGGTGAGGATACATTTGGTGCCAGAGATGAAGATTGGCAACTTTACAAATTGATGAGCAAAGATTATAATAATGACGATGATGAGGGACCTGATGAGGATGAGGCAGAGCTGGCCCGCATCTCTTCTAGGCTCCAGGACTTGGATCCAACATTTATACCCAAGTTAGAAGCCGGTACCTCTCAACCTGCTGAGGTGCCACGTGTTCGACCTCTGACCAAAGAAGATTTTAAGATTGTTCTTGGGGTCGAAAGATTCAGATGTCCTGAGCTATTGTTTAATCCAAACTGGATTGCGGTTGATCAGGTAGGATTAGATGAGATGGTTGGGGTCTCAATAAGGAGGTTACCATACAAGGATGAAAGCTTGGAAGAGAGACTGACCAGTTCCATACTTGTTACTGGTGGAAGTTCTCTTTTCCCTGGTATAGTTGAACGCCTGGAAGCTGGAATTCGGATGATTAGACCGTGTGGCGCACCGATAAAAATAGTTACAGCACTGGATCCAGTCATGGATGCATGGCGTGGGGCTGCTTCCTTTGCCTCAGCCTCACAGTTCCATATGCAAACTTTCAGTAGACTGGATTATTATGAAAAGGGTGAAGACTGGCTTCGCAATTATCAACTGCAATATACATTGTAA 2172 0.4342 MPFISKIQRQSDFNLFDSHTPIVIDNGASYFRIGWAGESEPRVVFRNIVQRPRHKVTGETVTIVGDHDPALLKYFDCTRSGPRSAFDSNVVYQFETMEYILDFGFDRMGANGTEIDHPVLITECVCNPVQSRSKMAELLFETYGVPSIAFGVDVAFSYKYNQQQGVCAKDGLALCPGFNTTHVIPFVDGEPVYEGCCRTNIGGFHVTDHLKQLLSLKYPYHLTRFTWEKVEDLKMEHCYIAPDYVSEARLFQKGAKEAEEKTRCWQLPWVPPPTEEPPSEEEIARKAAIKEKQGQRLREMAEAKRSSKINELENELHGLEFLLHQLEQVEESEVPSFLAETGYGSRQEIESARNKVMQSLRKAKGEPKNEQDETEKVDPAANEKYSLINIPDDMLTQEQLIEKKKQLSLKSMAEGRQRLKQKRYEEELERERKQQLEEEKRLENPELYLEQLHARYKDFSERVDQQKRLKTNGGHSNGNNLSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGARDEDWQLYKLMSKDYNNDDDEGPDEDEAELARISSRLQDLDPTFIPKLEAGTSQPAEVPRVRPLTKEDFKIVLGVERFRCPELLFNPNWIAVDQVGLDEMVGVSIRRLPYKDESLEERLTSSILVTGGSSLFPGIVERLEAGIRMIRPCGAPIKIVTALDPVMDAWRGAASFASASQFHMQTFSRLDYYEKGEDWLRNYQLQYTL 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02429 723 FunFam Actin-related protein 5 18 170 - -
Pumo9g02429 723 Gene3D Actin; Chain A, domain 4 519 612 - -
Pumo9g02429 723 Gene3D - 174 202 - -
Pumo9g02429 723 SUPERFAMILY Actin-like ATPase domain 17 158 IPR043129 -
Pumo9g02429 723 Gene3D Actin; Chain A, domain 4 203 256 - -
Pumo9g02429 723 SMART actin_3 19 720 IPR004000 -
Pumo9g02429 723 Pfam Actin 588 715 IPR004000 -
Pumo9g02429 723 Pfam Actin 17 268 IPR004000 -
Pumo9g02429 723 Coils Coil 449 469 - -
Pumo9g02429 723 MobiDBLite consensus disorder prediction 348 381 - -
Pumo9g02429 723 MobiDBLite consensus disorder prediction 355 380 - -
Pumo9g02429 723 PANTHER ACTIN 21 711 IPR004000 -
Pumo9g02429 723 Gene3D - 16 170 - -
Pumo9g02429 723 Coils Coil 419 445 - -
Pumo9g02429 723 FunFam Putative actin-related protein 5 683 711 - -
Pumo9g02429 723 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Pumo9g02429 723 Coils Coil 309 329 - -
Pumo9g02429 723 Gene3D - 683 711 - -
Pumo9g02429 723 Gene3D - 613 682 - -
Pumo9g02429 723 FunFam Actin-related protein 5 171 202 - -
Pumo9g02429 723 FunFam Actin-related protein 5 203 257 - -
Pumo9g02429 723 FunFam ARP5 actin-related protein 5 homolog 613 682 - -
Pumo9g02429 723 SUPERFAMILY Actin-like ATPase domain 170 715 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02429 Pumo-Chr9 58532915 58539190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02429 589 710 Miscellaneous Gene Families AT2G42100 32.787 2.26e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02429 K11672 - gmx:100804305 1308.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02429 9 58532915 58539190 Pumo9g02429 9 58532915 58539190 ECH
Pumo1g00156 1 2575724 2581062 Pumo9g02429 9 58532915 58539190 PCT