Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02362 ATGACGCTGATTTCCGACGTTGAAAGCCACGCGGATGTCGAAATCCCCGACACCGCTCATCAAATTAGCACCGATTCATGGTTTCAAGTGGGGTTCGTGCTCACCACAGGCGTCAACAGCGCGTATGTGCTTGGATATTCTGGGACCATCATGGTGCCCCTTGGTTGGGCATGGGGTGTCGTTGGTTTGATTCTCGCCACCGCAATATCGCTCTACGCGAATGCTCTTATCGCTAGGCTCCATGAATATGGAGGAACAAGGCATATTCGATATAGAGATCTTGCTGGATTTATATATGGTAGAAAAACTTATTCCCTCACATGGGCTCTACAGTATGTCAATCTTTTCATGATAAACGCCGGCTACATCATTTTGGCTGGTTCGGCTTTAAAGGCCACTTATGTTCTATTTAGGGAAGACGATGGGATGAAGCTTCCGTATTTTATTGCCATAGCTGGAATTGTGTGTGCAATGTTTGCCATTTGCATTCCCCATCTTTCGGCTCTTGGAATTTGGCTGGGATTTTCAACAGTCTTCAGCCTAGTATACATTGTTATAGCATTTGTACTGTCAATTAAAGATGGTATAGAATCACCACCTCGTGATTATAGCATTCCGGGGACACCAACAAGTAAAATATTCACAACAATTGGGGCGTCTGCTAATCTTGTGTTCGCATATAATACAGGAATGCTTCCTGAGATACAGGCAACCATCAGGCAGCCAGTTGTCAAGAACATGATGAAAGCCCTGTACTTTCAGTTTACAGTTGGAGTTCTGCCATTATATCTGGTAACCTTTGCAGGATATTGGGCTTATGGATCTTCAACAGCAACCTATTTGATGAGTGATGTCAATGGTCCAGTTTGGGCTAAGGCCATGGCCAACATTGCAGCCTTTCTTCAATCAGTCATTGCATTGCATATATTTGCAAGTCCAATGTATGAGTATTTGGATACCAAACATGGGATCAAAGGGAGTGCCCTCGCTTTTAAGAACTTGTCATTTAGAGTCTTGGTAAGAGGTGGCTACCTGACTCTAAACACATTTGTATCAGCTCTGTTGCCATTCCTTGGGGATTTCATGAGCCTCACTGGAGCTATCAGCACATTTCCCCTTACATTTATCCTTGCAAACCATATGTACCTAGTGGCAAATGAGAACAAACTAACATCCATCCAAAAGCTCTGGCATTGGATCAATATTTGTTTCTTTGTCCTCATGTCTGCTGCGGCAACTGTTGCAGCCCTGCGGCTTATTGCTTTAGACTCCAAAATGTACCATTTTTTTGCGGATTTATGA 1302 0.437 MTLISDVESHADVEIPDTAHQISTDSWFQVGFVLTTGVNSAYVLGYSGTIMVPLGWAWGVVGLILATAISLYANALIARLHEYGGTRHIRYRDLAGFIYGRKTYSLTWALQYVNLFMINAGYIILAGSALKATYVLFREDDGMKLPYFIAIAGIVCAMFAICIPHLSALGIWLGFSTVFSLVYIVIAFVLSIKDGIESPPRDYSIPGTPTSKIFTTIGASANLVFAYNTGMLPEIQATIRQPVVKNMMKALYFQFTVGVLPLYLVTFAGYWAYGSSTATYLMSDVNGPVWAKAMANIAAFLQSVIALHIFASPMYEYLDTKHGIKGSALAFKNLSFRVLVRGGYLTLNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLVANENKLTSIQKLWHWINICFFVLMSAAATVAALRLIALDSKMYHFFADL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02362 433 PANTHER OS05G0424000 PROTEIN-RELATED 24 415 - -
Pumo9g02362 433 Pfam Transmembrane amino acid transporter protein 24 413 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02362 Pumo-Chr9 57023794 57028440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02362 51 433 Organic Solute Cotransporters AT2G39890 74.413 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02362 K26247 - gmx:100500168 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02362 9 57023794 57028440 Pumo9g02362 9 57023794 57028440 ECH
Pumo1g00215 1 3412246 3415979 Pumo9g02362 9 57023794 57028440 PCT