Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00215 ATGGGGAAAGGAGACATTGAACTCGAGACAACAAACAAGGTCTATGACGAGGATGCAGAAGCAGGAGGGGACGTTGAAGTCCCAGATACCGCTCATCAGATTAGCACCGATTCATGGCTTCAAGTGTCTTTTATCCTCACGACCGGAATCAACAGTGCCTTTGTTCTTGGATATCCTGGGACCGTCATGGTTCCCCTGGGTTGGATCGGGGGTGTGGTTGGTCTAATTCTTGCTACCATAGCATCACTTTATGCAAATGCTCTAATTGCTTATCTCCATGAATTTGGAGGGCAAAGGCACATTAGGTATAGAGATCTTGCTGGATTTATATACGGTAAAAAAGCCTATAATCTCACATGGGTTCTGCAGTATATCAATCTTTTCATGATAAATACTGGCTACATCATTTTGGCCGGTTCAGCCTTGAAAGCTGCTTATGTTCTATTCAAGGATGATGGTCTGCTGAAACTTCCATATTGTATTGCCATAGGTGGACTTGTGTGTGCAATGTTTGCCATCTGCATTCCTCATCTTTCAGCTCTTGGAATTTGGCTAGGATTTTCAACAGTCTTCAGCCTAGCATATATTGTTATATCATTCGTGTTGTCGCTTAAAGATGGATTACAATCACCACCTCGAGATTACGAAATTCCAGGAGAAGGTGTAAGCAAAATATTTACAATAATTGGGGCATCTGCTAACCTCGTGTTTGCATTTAATACTGGCATGCTTCCTGAGATACAGGCAACGATTAGGGAACCAGTTGTGAAGAACATGATGAAAGCCCTGTACTTTCAGTTTACTGCTGGAGTTCTACCATTGTACCTGGTTGCCTTTACAGGATACTGGGCTTATGGATCTTCCACAGAAGTGTATTTGCTGAATAGTGTGAATGGTCCAGTTTGGGTGAAGGCTTTGGCCAATATCACAGCCTTTCTTCAATCAGTCATTGCATTACATATTTTTGCAAGTCCAATGTACGAGTTTTTGGATACTAAATATGGGATCAATGGAAGTGCAATGAATGTTAAAAACTTGGCATTTCGAATCGTGGTAAGAGGTGGCTACCTGGCATTTAACACATTTGTGGCAGCTTTCCTGCCATTCCTTGGAGATTTCATGAGCCTCACAGGAGCGATCAGCACATTTCCCCTTACATTTATTCTTGCAAACCACATGTACCTAAGGGCAAAGAAGGACAAACTAAACAGCTCACAAAAGCTCTGGCACTGGATCAACATTGGTTTCTTTGCCATTATGTCTCTTGCAGCAGCAATTTCAGCCATACGGCTCATTGCCCTAGACTCCAAAACATACCATGTTTTTGCTGATTTGTGA 1338 0.4238 MGKGDIELETTNKVYDEDAEAGGDVEVPDTAHQISTDSWLQVSFILTTGINSAFVLGYPGTVMVPLGWIGGVVGLILATIASLYANALIAYLHEFGGQRHIRYRDLAGFIYGKKAYNLTWVLQYINLFMINTGYIILAGSALKAAYVLFKDDGLLKLPYCIAIGGLVCAMFAICIPHLSALGIWLGFSTVFSLAYIVISFVLSLKDGLQSPPRDYEIPGEGVSKIFTIIGASANLVFAFNTGMLPEIQATIREPVVKNMMKALYFQFTAGVLPLYLVAFTGYWAYGSSTEVYLLNSVNGPVWVKALANITAFLQSVIALHIFASPMYEFLDTKYGINGSAMNVKNLAFRIVVRGGYLAFNTFVAAFLPFLGDFMSLTGAISTFPLTFILANHMYLRAKKDKLNSSQKLWHWINIGFFAIMSLAAAISAIRLIALDSKTYHVFADL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00215 445 PANTHER OS05G0424000 PROTEIN-RELATED 34 428 - -
Pumo1g00215 445 Pfam Transmembrane amino acid transporter protein 36 429 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00215 Pumo-Chr1 3412246 3415979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00215 63 445 Organic Solute Cotransporters AT2G39890 75.196 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00215 K26247 - gmx:100778997 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00215 1 3412246 3415979 Pumo1g00215 1 3412246 3415979 ECH
Pumo1g00215 1 3412246 3415979 Pumo9g02362 9 57023794 57028440 PCT