Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02341 ATGGTTGATCTAGATTGGCAAACAAAGATGGTTCGCTCCAACATGCCTCCAAAGTCCCCCAAACTCTCCCTCCCCGATAAGAACATCCCAATCCCAACTTTGCAACTCCCCCTTCGCCAAAACGACATCACCGCAGCGTCGTCTCCTGTTTGCGCCGCCTACGATAATTACCTTCGCCTTCCTGAGCTCAGAACCCTCTGGGCCTCCAACGACTTCCCTAATTGGGCCAACGAGCCCATCTTAAAGCCCGCCTTACACGCCCTCGAAATCACCTTCCGCTTCCTCGCAACCGTTTTATCCGATCCGAGACCGTACGTCAACAAGCGCGAATGGACCCGACGCGTCGAGTCTCTCGCCACGGTCCAAATCCAGATCATAGCCATGTTATGCGAAGACGAAGAAGAAAACCCCGAGACACGTGGCAACGCACCGGTGAGTGACATTAACGACTTTGCCAGTCAAAGCAGAAGCTACAGCGAGGAAAGCTTGCTCCCGCGCCTCGCCACGTGGCACAAATCCAAGGACGCAGCGCGGAGGATCCTTAACTCAGTGGAATGCGAGATGACGAGGTGCACGTACACCTTGGGTTTGGGAGAGGCCAATCTCGCGGGAAAGAAAATCTTTCTATACGACGCGGTTTGCCGGCCGAGCGAGATTCATTCCCTGGAGACGACGCCGTTTGATCACGTAGGGAACTACGAGAACAAGACGCTGCACGCGGCGCAGCAGATCGCGGAGTGTTGGACACGCGCGGTGAAGAAATTGCTCGAGAGAGTGGCGGAGTCGGTGGAGAAGAGAGCGTTGGAGAAAGCGGCGAGTGAGTGCCACGCGGTGGAGCGGATCTGGAAGCTTATGACGGAGGTTGAGGACGTGCACGTGATGATGGATCCGGAGGATTTTCTAAGGCTGAAGAAGGAGTTAGGGATGAGGACACGTGGCGAAACGGTGGCGTTTTGCTTCAGGTCGAGGGAGCTGGTGGAGGTGGCGAGGGTGTGCAGGGATCTGAGGCAGAAGGTGCCGGAGATATTGGAGGTGGAGGTGGACCCCACGGGTGGGCCCGGGATGATGGAGGCGGCGATGAAGGTTTACTCGGAGAAACGGAACGGGTTCGAGAAGGTTCATGTCTTGCAGGGTATGCAGGCGATTGAGGTGGCGATGAAGAGGTTCTTCTACGCGTATAAGCAGATTGTGACGGTTATGATGGGGAGCTCCGAGGCCGACGGGTTGACTCAGATATTCCTTGAACCCACTTATTTCCCTAGCTTGGATGCTGCCAAGACCTTTCTCGGTTATTATTGGGAAAATAATAACCAAAATACAGTTCCTTGGTAG 1332 0.5503 MVDLDWQTKMVRSNMPPKSPKLSLPDKNIPIPTLQLPLRQNDITAASSPVCAAYDNYLRLPELRTLWASNDFPNWANEPILKPALHALEITFRFLATVLSDPRPYVNKREWTRRVESLATVQIQIIAMLCEDEEENPETRGNAPVSDINDFASQSRSYSEESLLPRLATWHKSKDAARRILNSVECEMTRCTYTLGLGEANLAGKKIFLYDAVCRPSEIHSLETTPFDHVGNYENKTLHAAQQIAECWTRAVKKLLERVAESVEKRALEKAASECHAVERIWKLMTEVEDVHVMMDPEDFLRLKKELGMRTRGETVAFCFRSRELVEVARVCRDLRQKVPEILEVEVDPTGGPGMMEAAMKVYSEKRNGFEKVHVLQGMQAIEVAMKRFFYAYKQIVTVMMGSSEADGLTQIFLEPTYFPSLDAAKTFLGYYWENNNQNTVPW 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02341 443 Gene3D - 234 428 - -
Pumo9g02341 443 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 210 429 IPR037217 GO:0019441|GO:0020037|GO:0046872
Pumo9g02341 443 Pfam Hs1pro-1 N-terminus 1 185 IPR009869 GO:0006952
Pumo9g02341 443 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 439 IPR038759 -
Pumo9g02341 443 Pfam Hs1pro-1 protein C-terminus 188 435 IPR009743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02341 Pumo-Chr9 56724723 56726463 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02341 - - gmx:100778560 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02341 9 56724723 56726463 Pumo9g02341 9 56724723 56726463 ECH
Pumo1g00240 1 3659842 3661909 Pumo9g02341 9 56724723 56726463 PCT