Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00240 ATGGTTGATTTACATTGGAAATCAAAGATGCCAAGTTCCGACATGCCTTCCAAAACTCCGAAACTCTCTCTCTCCGACAAGTCCTTACCCTCTTTGCAACTACCCTTCCGCACCACAGATATCTCTCCCGCCGCACCTTCAGTTTGTGCTACCTACGATTACTATCTTCGTCTTCCTGAACTCAGAAAGCTTTGGAACTCCACAGATTTCCCTAATTGGACCAACGAACCAATTTTAAAACCTATCTTGCAAGCTCTCGAAATCACGTTCCGCTTTCTGTCCATTGTTTTTTCCGATCCAAGACCTTACTCCAATCACAGAGAATGGGCTCGCAAGATAGAGTCTCTCGCCATACATCAGATTGAGATCATTGCAATGCTCTGTGAAGATGAGGAATACAATTCCGAGACACGTGGCACTGCACCAACCGCTGATCTCAGTTTAAGCAGCGAGAGCAGAAGCTACAGCGAGGCCAGCCTGCTTCCGCGGCTTGCCACGTGGTACAAATCCAAGGACGTAGCGCAGAGGATTCTTCTCACCGTGGAATGCCAAATGAGGTGTTCCTTCACGCTAGGTTTGGGCGAGCTGAACCTAGCAGGGAAACCGAGCCTGCTCTACGACCTCGTGTGCAAACCGAACGAAATCCACGCGCTGAAGACCACGCCGTACGACGAGCGCGTGGAGAACCACGAGAACCACGCGGTGCACGCCACGCACCAGATCGCGGAGTCATGGATCCACGCGTCGCGGAAGCTGCTGGAGAGGATCGCCGACGCGATCCTCTCCAGAAGGTTCGAGAAGGCGGCGGAGGACTGCCACGCGGTGGAGCGGATCTGGAAGCTCCTCGCGGAGGTGGAGGACCTCCACCTGATGATGGATCCGGACGATTTCTTGAGGCTGAAGAACCAGCTCTCGGTGAAATCCTCGAGCGGCGAAACGGCGTCGTTCTGCTTCAGGTCGAAGGAGCTGGTGGAACTGACGAAGCTGTGCAGAGATCTGAGGCACAAGGTGCCGGAGATATTGGAGGTGGAGGTGGATCCGAAGGGAGGACCGAGGATTCAAGAGGCGGCGATGAAGCTCTACGTTTCGAAGAGCGCGTTCGAGAAGGTTCAGTTGTTGCAGGCGATGCAGGCGATTGAGGCGGCGATGAAGAGATTCTTCTACGCGTACAAGCAGGTGTTGGCGGTGGTGATGGGAAGCTCCGAGGCTAACGGTAACCGAGTTGGGTTGAGTTGCGACTCGGCTGACTCGTTGACTCAGATTTTCCTTGAACCGACGTATTTTCCAAGCTTGGATGCCGCCAAGACTTTTCTCGGGTACCTGTGGGATAATAACGATAACAAATGGGTATGA 1353 0.5351 MVDLHWKSKMPSSDMPSKTPKLSLSDKSLPSLQLPFRTTDISPAAPSVCATYDYYLRLPELRKLWNSTDFPNWTNEPILKPILQALEITFRFLSIVFSDPRPYSNHREWARKIESLAIHQIEIIAMLCEDEEYNSETRGTAPTADLSLSSESRSYSEASLLPRLATWYKSKDVAQRILLTVECQMRCSFTLGLGELNLAGKPSLLYDLVCKPNEIHALKTTPYDERVENHENHAVHATHQIAESWIHASRKLLERIADAILSRRFEKAAEDCHAVERIWKLLAEVEDLHLMMDPDDFLRLKNQLSVKSSSGETASFCFRSKELVELTKLCRDLRHKVPEILEVEVDPKGGPRIQEAAMKLYVSKSAFEKVQLLQAMQAIEAAMKRFFYAYKQVLAVVMGSSEANGNRVGLSCDSADSLTQIFLEPTYFPSLDAAKTFLGYLWDNNDNKWV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00240 450 Pfam Hs1pro-1 N-terminus 1 182 IPR009869 GO:0006952
Pumo1g00240 450 Gene3D - 204 437 - -
Pumo1g00240 450 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 210 438 IPR037217 GO:0019441|GO:0020037|GO:0046872
Pumo1g00240 450 MobiDBLite consensus disorder prediction 1 25 - -
Pumo1g00240 450 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 447 IPR038759 -
Pumo1g00240 450 Pfam Hs1pro-1 protein C-terminus 185 444 IPR009743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00240 Pumo-Chr1 3659842 3661909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00240 - - gmx:547603 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00240 1 3659842 3661909 Pumo1g00240 1 3659842 3661909 ECH
Pumo1g00240 1 3659842 3661909 Pumo9g02341 9 56724723 56726463 PCT