Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02323 ATGGGTAACAACACAGCAACATACAACAAATACAAAAGTTTCTTGTTCGTTATCAGAAAGTACAAGTTCACGGATCTGCTTCCGCCTGTCACTGAGCTGGTTCCACCTCAGGACCTTGAGGAGGCGTTTTCAAAGTTCACCGGAGGAGGGTCCCACATGACTGCGGAGGAGCTCCACCGTTTCATGGTGGAGCATCAGGGCGAGGAGGACTACACCTTATCGGATTTGGAAAAAGTTGTAGAGAAGGTTTTGCAAGAGAGAAAGACATGTCAAGAAACTATTAAGGTTGATCAAAATAGAGAACATGAGATCACCCTTGATGAGCTCTTCCGTTTTTTGCTTCATGATGATTTCAACGGTCCCTTGAAAGCTGAGGTACATCATGATATGGGTGCTCCATTGTCACATTATTTCATATATACAGGCCATAACTCCTATTTGACAGGGAATCAGCTCAGCAGTGACTGCAGTGAAGAACCAATCATAAAGGCTTTGAAAAGAGGCGTGCGTGTTATTGAACTTGATTTATGGCCAACTTGCAACAAGGATGATATTAAAGTAGATCATGGATGGACTCTTACCAACCCTGTCTCAGTTATCAAATGTCTAGAGTCCATAAAGGAATATGGTTTTGTCGCATCTCAGTACCCGGTGATCATAACCATAGAAGACCATCTTACAACAGAACTTCGAACTAAATTTGCAGAAATGGCAACTCAAATATTTGGGGAAATGCTTTATTACCCTGGGACAGATTGCCCTTGCTTAACAGAATTCCCTTCCCCGGAATCACTAAAAAATCGAGTTATTATATCAACCAAACCCCCGAAAGAACGTTTTAAGTCCAACCGTATCAAGGACAATCCTATGCTGAATGAAAGTGATTCATCTGAAGAAGAATCATGGGGAAATGAATCTCCAGACTCCAGTAAGAACGAAGTGGAGACTGAGGACATGCATAATGGAAGTGATCGTGATGAGGGAAATGTAAGTGCATGTGGATTTGACCACAAACCATATCAGGAGTGTTTACCTGATTACAAACACATAATTACTATCCATAATACGAAACTCAAGGGTTGCCTGAAGGATAAATTGAAAACAGACGGTGAAGTTAGACGCCTAAGTTGGAGTGAGAATACCCTTGAAAAGGCTTCAGAATCTCATGGAACAGATATTCTTAGGTTCACACAAAAAAATATCCTTAGGGTTTACCCGAGTGCAATGCGCGTCAAATCCACAAATTTCAAGCCACATATTGGGTGGATGTATGGGGCTCAGATGGTTGCATTCAACATGCAGGGGCATGGCAAATCACTCTGGTTGATGCAGGGGATGTTCAGGGCAAATGGAGGCTGTGGTTATGTAATGAAGCCTCAATTTCTAATGCAGAAGCATCAATGTGACAATGAGTTTGATCCTACAAGGATACAGTCAGTGAAGAAGACATTAAAGGTAAAAGTATACATGGGACATGGGTGGAGCTCAGATTTCAGTCCTACACACTTTGATAAGTGCTCTCCGCCAGACTTCTACACTAAGATCCGTATTGTTGGAATGCCTGGTGATGTTGCAACGAGAAAAACAAAGGTTATGATGGACAACTGGTTTCCTGTTTGGGATGAAGAATTTGAATTCCCTTTAACTGTTCCAGAGCTTGCATTGCTTCTGATACAAGTAAAGGACAAAGATCCTGGAAAGGATGACTTTGCTGGACAGACATGTTTGCCAGTGTCAGAGCTAAAACGAGGATTTCGTTCAGTCCCTTTGTATAACGAAAAGGGGGAGAAATTTAAATCTGTAAAGCTGTTGATGCGGTTTCAGTTTGAATGA 1833 0.419 MGNNTATYNKYKSFLFVIRKYKFTDLLPPVTELVPPQDLEEAFSKFTGGGSHMTAEELHRFMVEHQGEEDYTLSDLEKVVEKVLQERKTCQETIKVDQNREHEITLDELFRFLLHDDFNGPLKAEVHHDMGAPLSHYFIYTGHNSYLTGNQLSSDCSEEPIIKALKRGVRVIELDLWPTCNKDDIKVDHGWTLTNPVSVIKCLESIKEYGFVASQYPVIITIEDHLTTELRTKFAEMATQIFGEMLYYPGTDCPCLTEFPSPESLKNRVIISTKPPKERFKSNRIKDNPMLNESDSSEEESWGNESPDSSKNEVETEDMHNGSDRDEGNVSACGFDHKPYQECLPDYKHIITIHNTKLKGCLKDKLKTDGEVRRLSWSENTLEKASESHGTDILRFTQKNILRVYPSAMRVKSTNFKPHIGWMYGAQMVAFNMQGHGKSLWLMQGMFRANGGCGYVMKPQFLMQKHQCDNEFDPTRIQSVKKTLKVKVYMGHGWSSDFSPTHFDKCSPPDFYTKIRIVGMPGDVATRKTKVMMDNWFPVWDEEFEFPLTVPELALLLIQVKDKDPGKDDFAGQTCLPVSELKRGFRSVPLYNEKGEKFKSVKLLMRFQFE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02323 610 SMART C2_3c 483 590 IPR000008 -
Pumo9g02323 610 MobiDBLite consensus disorder prediction 277 293 - -
Pumo9g02323 610 SMART plcy_3 347 463 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pumo9g02323 610 ProSiteProfiles C2 domain profile. 464 592 IPR000008 -
Pumo9g02323 610 Gene3D - 31 120 - -
Pumo9g02323 610 SUPERFAMILY PLC-like phosphodiesterases 128 464 IPR017946 GO:0006629|GO:0008081
Pumo9g02323 610 PRINTS Phospholipase C signature 422 440 IPR001192 GO:0035556
Pumo9g02323 610 PRINTS Phospholipase C signature 258 275 IPR001192 GO:0035556
Pumo9g02323 610 PRINTS Phospholipase C signature 576 586 IPR001192 GO:0035556
Pumo9g02323 610 PRINTS Phospholipase C signature 401 422 IPR001192 GO:0035556
Pumo9g02323 610 PRINTS Phospholipase C signature 133 151 IPR001192 GO:0035556
Pumo9g02323 610 PRINTS Phospholipase C signature 159 179 IPR001192 GO:0035556
Pumo9g02323 610 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 21 609 IPR001192 GO:0035556
Pumo9g02323 610 Coils Coil 73 93 - -
Pumo9g02323 610 Gene3D Phosphatidylinositol (PI) phosphodiesterase 125 475 IPR017946 GO:0006629|GO:0008081
Pumo9g02323 610 ProSitePatterns EF-hand calcium-binding domain. 97 109 IPR018247 -
Pumo9g02323 610 SMART plcx_3 128 274 IPR000909 -
Pumo9g02323 610 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 128 274 - -
Pumo9g02323 610 CDD C2_PLC_like 481 610 - -
Pumo9g02323 610 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 371 461 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pumo9g02323 610 MobiDBLite consensus disorder prediction 277 330 - -
Pumo9g02323 610 MobiDBLite consensus disorder prediction 304 325 - -
Pumo9g02323 610 FunFam Phosphoinositide phospholipase C 478 610 - -
Pumo9g02323 610 Gene3D C2 domain 478 610 IPR035892 -
Pumo9g02323 610 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 483 609 IPR035892 -
Pumo9g02323 610 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 376 462 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pumo9g02323 610 Pfam Phosphatidylinositol-specific phospholipase C, X domain 130 274 IPR000909 -
Pumo9g02323 610 Pfam C2 domain 483 584 IPR000008 -
Pumo9g02323 610 SUPERFAMILY EF-hand 27 130 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02323 Pumo-Chr9 56467285 56480168 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02323 2 610 Acyl Lipid Metabolism Gene Families AT2G40116 53.566 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02323 K05857 - gmx:100820253 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00257 1 3892094 3896360 Pumo9g02323 9 56467285 56480168 PCT