Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02322 ATGGGCACCACCGTCACCTACGGCTACAAAATGTTCAAGTACTTCAACAGAAAATTCGCCGTCTCCGAGCAGGCCCCTCCGCCGGACGTCAAGGACGCCTTCTCCGCCTTCTCCCACGGCGCCGCCTCCATGTCCGCCGACCAGCTCCTCCGCTTCCTGCACGACCACCAACTCGAAATGGACTGCACCGCAGAGGATTCCAACCGCATCCTCGACAGCATCCTGCAATCGCGCAAACAAAACGACGACGACGACGCCGAATGCGAGCCCCCCGACAACAACGGCCTCACCCTCGACGAGTTCTTCCGCTTCCTCTTCCTCCTCGATTTCAACGATCCCCTCAAATCCCAGGTACATCATGATATGAATGCTCCGTTGTCACATTATTTCATATATACAGGGCACAATTCCTACCTGACTGGGAATCAACTGAGCAGCGATTGCAGTGATGTGCCAATCATAAAGTCTTTGCAACGAGGTGTGCGAGTAATTGAACTAGATTTATGGCCAAATTCAACTAAAGATGATATTGACGTAGTTCATGGAAGGACACTTACTGCTCCTGTCTCACTTATCCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTGACTACCCAGTCATCATAACTTTAGAGGACCACCTTACACCATTTCTTCAAGCTAAAGCTGCAGAGATGATAGCTCAAGTATTTGGAGATATGCTCTATTTTCCTCAGACAGATTCTCTGACAGAATTTCCCACACCAGAATCAGTGAAAGGTCGAATTCTTATATCAACCAAACCACCAAAAGAATATCTTGAATCCAAGCAATTCAAGGATAGTGACAGTGAGAGGGAATCAACTGAAGAAGGATCATTATCGCCATGCGTTATCCCTGAATTGGAGGTTATTGATGAGAAGTTAAATGGAAGTGATCTTGATGAGGAAGGCTTGAATGCTCGTGATAAAAAACCAGACCAACCGAGTGCACCAGAGTACAAACGTTTGATTACAATCCATGCTGGGAAGCCAAAGGGCCATGTAAAGGACCACTTGAACATTGTTGGGGGTGTAAAGCGCTTGAGCTTGAGCGAACAGGAACTTGAAAAGGCTTCTGCCACTTATGGATCTGATATTGTTAGATTTACACAGAAGAATATTATCAGGGTGTATCCAAAGGGAACACGTGTTAACTCCTCAAATTACAGGCCACATATAGGATGGATGTACGGAGCTCAGATGGTGGCATTTAACATGCAGGGGCATGGAAAATCACTCTGGTACATGCAAGGGATGTTTAGAGCAAATGGTGGGTGTGGTTATGTGAAAAAGCCTTCATTTCTAATAGAAAAAGGCCCAGATGATGAGATTTTTGATCCTAAAAGAACATTACCAGTGAAGAAGACGTTGAAGGTAAAAGTATATATGGGAAACGGGTGGAGCACAGATTTCAGCAAAACACACTTTGATACATTCTCTCCACCGGACTTTTACACAAAGGTTTGCATTGTTGGAGTACCAGCTGATAATGCCAATAAGAAGACCAAGATAATTCAAGATGATTGGTTTCCTGTCTGGGACGAAGAGTTTGAATTTCCCTTGACTGTTCCAGAACTAGCTTTGCTCCGAATAGAAGTTCGAGAGTATGATAAGCATGAAACGGATGACTTTGGCGGGCAAACATGTTTGCCAGTCTCTGAGCTAAGATCTGGTTTCCGTGCAGTCCCTCTATTTGATGAGAAGGGCGAGCAATTAAAATCTGTAAAGCTTTTAATGCGGTTTCAGTTCGAAGAACTATAA 1791 0.4461 MGTTVTYGYKMFKYFNRKFAVSEQAPPPDVKDAFSAFSHGAASMSADQLLRFLHDHQLEMDCTAEDSNRILDSILQSRKQNDDDDAECEPPDNNGLTLDEFFRFLFLLDFNDPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKSLQRGVRVIELDLWPNSTKDDIDVVHGRTLTAPVSLIQCLKSIKEYAFVKSDYPVIITLEDHLTPFLQAKAAEMIAQVFGDMLYFPQTDSLTEFPTPESVKGRILISTKPPKEYLESKQFKDSDSERESTEEGSLSPCVIPELEVIDEKLNGSDLDEEGLNARDKKPDQPSAPEYKRLITIHAGKPKGHVKDHLNIVGGVKRLSLSEQELEKASATYGSDIVRFTQKNIIRVYPKGTRVNSSNYRPHIGWMYGAQMVAFNMQGHGKSLWYMQGMFRANGGCGYVKKPSFLIEKGPDDEIFDPKRTLPVKKTLKVKVYMGNGWSTDFSKTHFDTFSPPDFYTKVCIVGVPADNANKKTKIIQDDWFPVWDEEFEFPLTVPELALLRIEVREYDKHETDDFGGQTCLPVSELRSGFRAVPLFDEKGEQLKSVKLLMRFQFEEL 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02322 596 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 359 445 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pumo9g02322 596 SMART plcy_3 330 446 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pumo9g02322 596 Gene3D Phosphatidylinositol (PI) phosphodiesterase 117 458 IPR017946 GO:0006629|GO:0008081
Pumo9g02322 596 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 466 593 IPR035892 -
Pumo9g02322 596 SUPERFAMILY EF-hand 11 122 IPR011992 -
Pumo9g02322 596 Gene3D C2 domain 461 596 IPR035892 -
Pumo9g02322 596 CDD C2_PLC_like 464 594 - -
Pumo9g02322 596 CDD PI-PLCc_plant 119 433 - -
Pumo9g02322 596 FunFam Phosphoinositide phospholipase C 461 594 - -
Pumo9g02322 596 ProSiteProfiles C2 domain profile. 447 576 IPR000008 -
Pumo9g02322 596 MobiDBLite consensus disorder prediction 270 286 - -
Pumo9g02322 596 Gene3D - 24 113 - -
Pumo9g02322 596 SMART plcx_3 120 264 IPR000909 -
Pumo9g02322 596 Pfam Phosphatidylinositol-specific phospholipase C, X domain 122 264 IPR000909 -
Pumo9g02322 596 PRINTS Phospholipase C signature 248 265 IPR001192 GO:0035556
Pumo9g02322 596 PRINTS Phospholipase C signature 125 143 IPR001192 GO:0035556
Pumo9g02322 596 PRINTS Phospholipase C signature 384 405 IPR001192 GO:0035556
Pumo9g02322 596 PRINTS Phospholipase C signature 560 570 IPR001192 GO:0035556
Pumo9g02322 596 PRINTS Phospholipase C signature 405 423 IPR001192 GO:0035556
Pumo9g02322 596 PRINTS Phospholipase C signature 151 171 IPR001192 GO:0035556
Pumo9g02322 596 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 12 593 IPR001192 GO:0035556
Pumo9g02322 596 FunFam Phosphoinositide phospholipase C 25 116 - -
Pumo9g02322 596 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 120 264 - -
Pumo9g02322 596 SUPERFAMILY PLC-like phosphodiesterases 120 447 IPR017946 GO:0006629|GO:0008081
Pumo9g02322 596 MobiDBLite consensus disorder prediction 270 290 - -
Pumo9g02322 596 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 358 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pumo9g02322 596 SMART C2_3c 466 574 IPR000008 -
Pumo9g02322 596 Pfam C2 domain 466 568 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02322 Pumo-Chr9 56459779 56464400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02322 6 594 Acyl Lipid Metabolism Gene Families AT2G40116 60.065 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02322 K05857 - gmx:100777010 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00258 1 3897955 3905444 Pumo9g02322 9 56459779 56464400 ECH
Pumo9g02322 9 56459779 56464400 Pumo9g02322 9 56459779 56464400 ECH
Pumo1g00258 1 3897955 3905444 Pumo9g02322 9 56459779 56464400 PCT