Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02321 ATGACTTCGAAACAGACATACAGCGTGTGCTTCTGCTGGCGGCGGCGGTTCAAGCTGGCCCTGGCGGAGGCGCCGTCGGAGATCAAGACCCTCTTCGAGGAGTACTCGGAAAATGAGGTCATGACACCGTCGCATCTGAAGAGGTTCCTTGTCGATGTGCAGAGGCAAGAGAAGGCCACTGAAGAAGACGCGCAAGCCATCATCGATAGCTTCAGGCATTTCCATCGCAGAGGCGTTGGCCTCAATCTCGAAACTTTCTTCAAGTACCTCTTCGGTGACGATAACCCCCCTCTTCTTCCTTCTCATGGGGTGCACCATGATATGACTTTACCCTTGTCTCATTATTTCATATATACTGGCCATAATTCCTATTTAACTGGGAATCAGCTGAGCAGTGACTGCAGTGACGTCCCCATCATAAATGCACTGAAGAGAGGTGTGCGGGTGATTGAATTGGACATATGGCCTAATGCAACAAAGGATAATATAGATGTTCTTCATGGAAGGACATTGACTACTCCTGTAGAGCTCATCAGATGTTTGAGGTCTATTAAGGAACATGCCTTTGTGGCATCAGAATATCCAGTTGTAATAACCCTAGAAGACCACCTTACACCAGATCTTCAGGCTAAAGTGGCTGAGATGGTTACTGAAACATTTGGAGACATACTATTTACTCCAAACTCAGAAAGTGTGAAGGAATTCCCTTCTCCTGAATCACTTAAAAAGAGAATTATTATATCAACCAAACCACCTAAGGAGTACCTTGAGGCAAAAGAAAAGGAAAAAGGGGATGATTCACAGCACGAAAAGGAGAAAGGGGATGATTCACTGCATGGAAAGGCATCGGGCGAAGATGAAGCTTGGGGGAAGGAAGTCCCAAGCTTGAAAGGTGGTACTATAGAGGATTACAAGGACAACAATGTGGATGAAGATCTTAATGATGAGGAAGAATTTGATGAATCAGACAAGTCACATCATAATGAAGCTCCAGAAGCTCTGGAAGCTCCAGAATATAGACACCTAATTGCCATTCATGCTGGGAAGCCTAAAGGTGGATTAGCGGAATGCCTTAAAGTGGATCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGCAACAGCTTGAAAAGGCTGCTATAAATCATGGGCAACAAATTGTCAGGTTTACTCAGCGGAATATACTGAGGGTGTATCCAAAAGGTACTCGCATTGACTCATCAAATTATAACCCATTAATTGGGTGGATGCATGGAGCTCAAATGGTTGCATTTAACATGCAGGGGTATGGGAGATCTCTTTGGTTGATGCATGGAATGTTCAGAGCCAATGGAGGGTGTGGTTATGTTAAAAAACCAGATTTTCTATTAAAGACTGGTCCAGATGACGAGGTCTTTGATCCTAAAGCTAAGTTACCTGTGAAGACTACTTTGAAGGTGACTGTATATATGGGGGAAGGATGGTATTATGATTTCAAGCATACACACTTTGATCAATATTCACCTCCAGACTTCTACACAAGAGTGGGGATTGCTGGAGTCCCTAATGATACTATAATGAAGAGAACTAGGGCAATAGAGGATAATTGGTTACCTACATGGAATGAGGTATTCGAGTTCCCTCTTACTGTTCCAGAGTTGGCCTTGCTTCGCATAGAAGTTCATGAGTATGACATGTCTGAGAAAGATGACTTTGGTGGACAAACATGCCTACCTATCTTGGAGCTTAGAAGTGGCATTCGAGCAATTCCACTGCATAGCCAAAAGGGAGATAAATACAACACTGTAAAGCTTCTCATGCGCTTTGAGTTTATTAATAATTGA 1821 0.4344 MTSKQTYSVCFCWRRRFKLALAEAPSEIKTLFEEYSENEVMTPSHLKRFLVDVQRQEKATEEDAQAIIDSFRHFHRRGVGLNLETFFKYLFGDDNPPLLPSHGVHHDMTLPLSHYFIYTGHNSYLTGNQLSSDCSDVPIINALKRGVRVIELDIWPNATKDNIDVLHGRTLTTPVELIRCLRSIKEHAFVASEYPVVITLEDHLTPDLQAKVAEMVTETFGDILFTPNSESVKEFPSPESLKKRIIISTKPPKEYLEAKEKEKGDDSQHEKEKGDDSLHGKASGEDEAWGKEVPSLKGGTIEDYKDNNVDEDLNDEEEFDESDKSHHNEAPEALEAPEYRHLIAIHAGKPKGGLAECLKVDPDKVRRLSLSEQQLEKAAINHGQQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPDFLLKTGPDDEVFDPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTIMKRTRAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPILELRSGIRAIPLHSQKGDKYNTVKLLMRFEFINN 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02321 606 MobiDBLite consensus disorder prediction 253 308 - -
Pumo9g02321 606 SMART plcy_3 339 456 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pumo9g02321 606 CDD PI-PLCc_plant 105 443 - -
Pumo9g02321 606 SMART C2_3c 476 584 IPR000008 -
Pumo9g02321 606 Pfam C2 domain 477 577 IPR000008 -
Pumo9g02321 606 Pfam Phosphatidylinositol-specific phospholipase C, X domain 108 250 IPR000909 -
Pumo9g02321 606 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 476 604 IPR035892 -
Pumo9g02321 606 MobiDBLite consensus disorder prediction 253 292 - -
Pumo9g02321 606 PRINTS Phospholipase C signature 570 580 IPR001192 GO:0035556
Pumo9g02321 606 PRINTS Phospholipase C signature 234 251 IPR001192 GO:0035556
Pumo9g02321 606 PRINTS Phospholipase C signature 415 433 IPR001192 GO:0035556
Pumo9g02321 606 PRINTS Phospholipase C signature 111 129 IPR001192 GO:0035556
Pumo9g02321 606 PRINTS Phospholipase C signature 394 415 IPR001192 GO:0035556
Pumo9g02321 606 PRINTS Phospholipase C signature 137 157 IPR001192 GO:0035556
Pumo9g02321 606 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 369 455 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pumo9g02321 606 Gene3D C2 domain 471 606 IPR035892 -
Pumo9g02321 606 SUPERFAMILY PLC-like phosphodiesterases 106 457 IPR017946 GO:0006629|GO:0008081
Pumo9g02321 606 FunFam Phosphoinositide phospholipase C 22 101 - -
Pumo9g02321 606 Pfam Phosphoinositide-specific phospholipase C, efhand-like 26 91 IPR015359 -
Pumo9g02321 606 ProSiteProfiles C2 domain profile. 457 586 IPR000008 -
Pumo9g02321 606 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 12 603 IPR001192 GO:0035556
Pumo9g02321 606 Gene3D Phosphatidylinositol (PI) phosphodiesterase 103 469 IPR017946 GO:0006629|GO:0008081
Pumo9g02321 606 SMART plcx_3 106 250 IPR000909 -
Pumo9g02321 606 SUPERFAMILY EF-hand 17 108 IPR011992 -
Pumo9g02321 606 FunFam Phosphoinositide phospholipase C 471 604 - -
Pumo9g02321 606 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 368 454 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pumo9g02321 606 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 106 250 - -
Pumo9g02321 606 Gene3D - 22 102 - -
Pumo9g02321 606 CDD C2_PLC_like 474 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02321 Pumo-Chr9 56446602 56451909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02321 3 604 Acyl Lipid Metabolism Gene Families AT3G55940 66.886 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02321 K05857 - gmx:547864 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00259 1 3908801 3912506 Pumo9g02321 9 56446602 56451909 ECH
Pumo9g01551 9 43592997 43602411 Pumo9g02321 9 56446602 56451909 ECH
Pumo9g02321 9 56446602 56451909 Pumo9g02321 9 56446602 56451909 ECH
Pumo1g00259 1 3908801 3912506 Pumo9g02321 9 56446602 56451909 PCT