Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02296 ATGTCAAACACTGAAGAAGAAGAACCAACTCTTCCCAACCCTAACAATCACACTCAACACTCCACCACCGGCGATGCGGAACCCCGCGACGACGACGACGACGACGACATTGAAGAAGAAGACGACGACGATGACGACGTCGTTCGGGAACCGAATCGCGGAATTCCCCAATCCGCAGCGTCCAAGTTGCGGGAGCAGCGGTTCAAGGTGGAAACCCTATCGCAGCGCTTGTCGTCGGAGCTGGTTCCGATCCGAGTCCACGACGTGGTTATAAAAGGTAACACGAAGACCAAGGATTGGGTTATTGAAGCGGAGCTGAAAGGCATCGAGAACGCCACCAGCATGCAGGAGCTTATGCAAGCTTCGCAAATCGCCATTGCCAGGCTTCAGGGCCTCGAAATCTTCGATTCCTGCAAGGTTCGTCTCGAGGCTGGACCACGGGAGCTTCCAAACACTGCCAATGTCATCGTCGACGTTGTCGAAACCGACAGCAAAGTTTCCGGCGAATTCGGCGTTTATACCAAACCCTCGACTAGTTCTTGGACTGCTGAAGGTGCTCTTAAGTATAAGAACTTGTTGGGTTATGGTGATCTATGGGATGCTTCTTTGGCCTATGGTGCCAACCAAGCAACTGAGGTGAGTTTAGGGGTGTATGCCCCTCGAGTTAAAGGATTTTTGACTCCTATTGTAACACGGATATCCATGCTTTCCCAAGATTGGCAAGAGTCTTCCTCATATAAAGAGCGGTTGTTGGGTGCATCTCTTGGCTTAATCTCGACAAAGCACCATGACTTAGCATACACTCTTGGATGGCGTACCTTAACAGATCCGTCACAGATGTCATCCAGGTCTATAAGGAGGCAGCTTGGGCACGGTTTAGTGTCATCTTTGAAGTATACATTTAAAATTGATAGGAGAAATTCTCCTATTAGACCAACAAAAGGATATGCTTTTCTTTCCACCACTCACATTGGTGGCCTTACACCAGATCCCAGGAGCTTGCGGTTTCTGCGTCAGGAGTTCGATGTTCGCTTAGCTGTCCCTTTTGGGTTTTACAATACAGCACTAAACCTTGGGATATCTGCTGGTGCTGTTTTTCCATGGGGGCATGGATTCAATACCAAGCCATCTCCCCTTCCAGAAAGGTTTTATTTGGGTGGTGATTTTTCTCCAGTTTGCACCCTAGGAGGACCAACAACATTATGGGGATTTAAAACTAGAGGATTAGGTCCTACTGAACCTCGGAGGCAAAATAGAGATGGATCCAATGATGACAATGTTGATTCCTCTGGTTGGGACTTCATTGGTGGAGATCTTGCTGTTACTGCTTTTGCAGATCTCTCTTTTGATCTTCCAATTAGGTGGTTGAGAGAACATGGAATCCATGGACATGTTTTTGCTGGTTCTGGGAATGCTGCTAAATTAACTCAGAATGAATATAAGCACTTCTCTCCTCGGAAGTTCTTAGAATCCTTTCGAATGTCAGTGGGATGTGGAGTTGTTATTCCTACTAGACTCTTCCGCCTAGAGGGTAACTACTTTTACATACTCAGAAAGGATGAGCATGATCGTGGGAAGACTGGATTTAGGTTTAGCTTCTCAGCTCCTTCATAG 1614 0.4721 MSNTEEEEPTLPNPNNHTQHSTTGDAEPRDDDDDDDIEEEDDDDDDVVREPNRGIPQSAASKLREQRFKVETLSQRLSSELVPIRVHDVVIKGNTKTKDWVIEAELKGIENATSMQELMQASQIAIARLQGLEIFDSCKVRLEAGPRELPNTANVIVDVVETDSKVSGEFGVYTKPSTSSWTAEGALKYKNLLGYGDLWDASLAYGANQATEVSLGVYAPRVKGFLTPIVTRISMLSQDWQESSSYKERLLGASLGLISTKHHDLAYTLGWRTLTDPSQMSSRSIRRQLGHGLVSSLKYTFKIDRRNSPIRPTKGYAFLSTTHIGGLTPDPRSLRFLRQEFDVRLAVPFGFYNTALNLGISAGAVFPWGHGFNTKPSPLPERFYLGGDFSPVCTLGGPTTLWGFKTRGLGPTEPRRQNRDGSNDDNVDSSGWDFIGGDLAVTAFADLSFDLPIRWLREHGIHGHVFAGSGNAAKLTQNEYKHFSPRKFLESFRMSVGCGVVIPTRLFRLEGNYFYILRKDEHDRGKTGFRFSFSAPS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02296 537 FunFam Outer membrane OMP85 family protein 173 535 - -
Pumo9g02296 537 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 173 535 - -
Pumo9g02296 537 MobiDBLite consensus disorder prediction 1 22 - -
Pumo9g02296 537 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 46 534 IPR039910 -
Pumo9g02296 537 MobiDBLite consensus disorder prediction 1 64 - -
Pumo9g02296 537 FunFam Outer membrane OMP85 family protein 83 162 - -
Pumo9g02296 537 Gene3D membrane protein fhac 83 162 - -
Pumo9g02296 537 MobiDBLite consensus disorder prediction 406 425 - -
Pumo9g02296 537 MobiDBLite consensus disorder prediction 28 47 - -
Pumo9g02296 537 Pfam Omp85 superfamily domain 191 534 IPR000184 GO:0019867
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02296 Pumo-Chr9 56144888 56148843 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02296 K07277 - gmx:100802876 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02296 9 56144888 56148843 Pumo9g02296 9 56144888 56148843 ECH
Pumo1g00277 1 4369641 4374011 Pumo9g02296 9 56144888 56148843 PCT