Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02276 ATGAGAACAGGATGGGCTGATGGACCAGAATTTGTGACTCAATGTCCCATTCGTCCTGGAGAAAGTTACACATATCGTTTTACCATTCAAGGACAAGAGGGCACACTTTGGTGGCACGCTCATAGCTCATGGCTAAGAGCCACTGTTTATGGTGCTTTAATCATTCACCCAAGGGAGGGAGAGGCATATCCTTTCCCTAAGCCAAAGCGCGAGACATCAATTCTTCTTGGGGAATGGTGGGACGCAAACCCGATCGATGTTTTGAGACAATCTCAACAAACAGGAGCAGCGCCGAATAATTCTGATGCATACACCATCAATGGTCAACCTGGCGATCTTTACAAGTGCACCACCATTGTTCCAATAGATTCTGGCGAGACCAACCTCCTAAGGGTCATCAATTCAGCACTGAACCAACCCTTATTCTTCACAGTGGCCAACCACAAACTCACAGTGGTTGGTGCCGATGCCTCCTACCTCAAACCCTTCACCACCAACGTCATCATGCTGGGACCAGGCCAAACCACCGATGTCCTCATCCAAGGTGACCAACCACCCTCACGCTACTACATGGCCGCACGTGCCTACCAATCCGCACAAAACGCCCCCTTTGACAACACCACCACCACAGCCATTCTCGATTACAAATCAGCACCGTGTCCCGCAAAGGGTTCATCGATCAAACCCGTTATGCCCTCTCTCCCTGCCTACAACGACACCAACACAGTCACTGCATTCAGCAGAAGCTTCAGAAGCCCCAGAAAGGTTGAAGTCCCCGCTGAAATCGATGACAACCTCTTCTTCACCATTGGCCTTGGACTCAACAAGTGCCCTCCAAATTTCAACGCAAACCAATGCCAGGGACCAAACGGAACACGCTTCACTGCCAGCATGAACAATGTCTCGTTTGTTCTCCCCAACAACGTTTCCATCTTGCAGGCTCATCACCTTGGAGTGCAGGGAGTGTTCACCACTGATTTTCCAACACAACCACCTGTTAAATTTGATTATACTGGTAATGTGAGTCGTTCATTGTGGCAACCTGTTCCCGGGACTAAAGTGACCAAGTTGAAGTTTGGATCGAGGGTGCAGATTGTGTTGCAGGATACTAGCATTGTGACCCCTGAGAACCACCCCATTCACCTTCATGGGTATGATTTCTACATCGTGGCTGAGGGGTTCGGAAATTTTGACCCCAACAAAGATACTTCTAAGTTCAACCTTGTTGATCCACCTATGAGGAACACTGTGGCCTGTGCCAGTGAATGGATGGGCAGTTATCAGATTTGTCGCTGA 1296 0.4915 MRTGWADGPEFVTQCPIRPGESYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPREGEAYPFPKPKRETSILLGEWWDANPIDVLRQSQQTGAAPNNSDAYTINGQPGDLYKCTTIVPIDSGETNLLRVINSALNQPLFFTVANHKLTVVGADASYLKPFTTNVIMLGPGQTTDVLIQGDQPPSRYYMAARAYQSAQNAPFDNTTTTAILDYKSAPCPAKGSSIKPVMPSLPAYNDTNTVTAFSRSFRSPRKVEVPAEIDDNLFFTIGLGLNKCPPNFNANQCQGPNGTRFTASMNNVSFVLPNNVSILQAHHLGVQGVFTTDFPTQPPVKFDYTGNVSRSLWQPVPGTKVTKLKFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPNKDTSKFNLVDPPMRNTVACASEWMGSYQICR 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02276 431 SUPERFAMILY Cupredoxins 259 418 IPR008972 -
Pumo9g02276 431 SUPERFAMILY Cupredoxins 65 253 IPR008972 -
Pumo9g02276 431 Pfam Multicopper oxidase 72 217 IPR001117 -
Pumo9g02276 431 FunFam Laccase 69 256 - -
Pumo9g02276 431 Gene3D - 280 427 IPR008972 -
Pumo9g02276 431 Pfam Multicopper oxidase 327 419 IPR011706 GO:0005507|GO:0016491
Pumo9g02276 431 Pfam Multicopper oxidase 2 59 IPR011707 GO:0005507
Pumo9g02276 431 NCBIfam laccase 1 420 IPR017761 GO:0046274|GO:0048046|GO:0052716
Pumo9g02276 431 Gene3D - 69 255 IPR008972 -
Pumo9g02276 431 PANTHER MULTI-COPPER OXIDASE 1 421 IPR045087 -
Pumo9g02276 431 Gene3D - 1 68 IPR008972 -
Pumo9g02276 431 CDD CuRO_2_LCC_plant 74 215 IPR034285 -
Pumo9g02276 431 SUPERFAMILY Cupredoxins 2 89 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02276 Pumo-Chr9 55932891 55934680 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02276 K05909 - gmx:100796956 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00296 1 4555369 4559796 Pumo9g02276 9 55932891 55934680 PCT