Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01884 ATGATGGGTCAGATCGTAAAGAGGAAGAAGAAGGGACGTCCCTCCAAGGCAGATCTGGCTCGCCGCTCCGGCGAATCTCCGGCCACCTCGCAGCCAGACCTCCGACGGAGCCGCCGCCGCCGGAATGTGCGCTACAACATCGACTACGACGACTACCTCGACGAGGAGGACGAGGACGAGGAAGAGGACGAGAGGAGGCGCGAGAAGAAGAAGCTGAAGCTCGTCGTGAAGCTCAACAACCATGAGGAAGAGGACGAGGACGATGACGACAACGCGCCGAGTCGCGGAGGGGCGCGTGGGGCGCACGCGCCGGATGAAAAGGGGGAAGAGGATGAGGAAGAAGAGGAGGGAGAGGAAGAAGAGGAGGAGGAAGAAGAGGGAAATGAGGACGCGGAGGAGCACGAAGAAGAGCGTGAGGTAAAGGGCAGAAAAGTGGATTCTAAAGGGCTCCACCCCGTTTCAGTGTTGGGAACTCCATCGAAGCTTCCACCTGGGATTCCGTTGCCTGACAAGAGGACCCTGGAGTTGATCCTTGACAAGCTTCAAAAGAAGGATACATATGGCGTGTATGCGGAGCCAGTGGATCCAGAAGAGCTTCCTGATTATCACGATGTGATTGAGCATCCGATGGACTTTGCCACAGTGAGGAAGAAGTTGGCAAATGGATCTTATCCTACCTTGGAACAATTTGAGAGTGATGTATTTTTGATTTGCTCAAATGCAATGCAATACAATGCAGCGGAGACAATATATCACAAACAGGCACGATCAATACAAGAACTAGCAAGGAAAAAGTTTGAAAAGTTAAGGATTGACTTTGAACGTTCTCAGAGTGAGCTGAAGTCTGAACAAAAATCAAGATCTAATTCCCTGGTTAAGAAGCTAGCAAAGAAGCCGATGGGTCATGCTTCCCAGGAACCTGTTGGCTCTGATTTTTCCTCAGGTGCAACTCTTGCTACAATTGGAGATGTACTGCCAACTTCCCATCCAATGCAAGGTGTTGTATGTGAAAGGCCTGGCAATATTGATGGCCTTCTGGAGGGGAATGCTTTCTTGATTGATGCAAATCAAGAGAAAGCAGAAGACTATATATCAGGTATCACAGAAGAGATCTCTATTTCATGCCTTCATTGTTCAATTTTGCATACTCAGTTGGATATTACTGTCATCATCTAG 1176 0.494 MMGQIVKRKKKGRPSKADLARRSGESPATSQPDLRRSRRRRNVRYNIDYDDYLDEEDEDEEEDERRREKKKLKLVVKLNNHEEEDEDDDDNAPSRGGARGAHAPDEKGEEDEEEEEGEEEEEEEEEGNEDAEEHEEEREVKGRKVDSKGLHPVSVLGTPSKLPPGIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRKKLANGSYPTLEQFESDVFLICSNAMQYNAAETIYHKQARSIQELARKKFEKLRIDFERSQSELKSEQKSRSNSLVKKLAKKPMGHASQEPVGSDFSSGATLATIGDVLPTSHPMQGVVCERPGNIDGLLEGNAFLIDANQEKAEDYISGITEEISISCLHCSILHTQLDITVII 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01884 391 Gene3D - 169 308 IPR036427 GO:0005515
Pumo9g01884 391 MobiDBLite consensus disorder prediction 134 148 - -
Pumo9g01884 391 SMART bromo_6 163 271 IPR001487 GO:0005515
Pumo9g01884 391 Coils Coil 53 73 - -
Pumo9g01884 391 CDD Bromodomain 170 266 - -
Pumo9g01884 391 MobiDBLite consensus disorder prediction 1 167 - -
Pumo9g01884 391 PANTHER BROMODOMAIN CONTAINING PROTEIN 7 359 - -
Pumo9g01884 391 MobiDBLite consensus disorder prediction 107 133 - -
Pumo9g01884 391 MobiDBLite consensus disorder prediction 277 311 - -
Pumo9g01884 391 Coils Coil 110 137 - -
Pumo9g01884 391 PRINTS Bromodomain signature 215 233 IPR001487 GO:0005515
Pumo9g01884 391 PRINTS Bromodomain signature 233 252 IPR001487 GO:0005515
Pumo9g01884 391 PRINTS Bromodomain signature 199 215 IPR001487 GO:0005515
Pumo9g01884 391 ProSitePatterns Bromodomain signature. 188 244 IPR018359 -
Pumo9g01884 391 MobiDBLite consensus disorder prediction 1 16 - -
Pumo9g01884 391 ProSiteProfiles Bromodomain profile. 182 252 IPR001487 GO:0005515
Pumo9g01884 391 MobiDBLite consensus disorder prediction 63 81 - -
Pumo9g01884 391 Pfam Bromodomain 176 256 IPR001487 GO:0005515
Pumo9g01884 391 SUPERFAMILY Bromodomain 159 269 IPR036427 GO:0005515
Pumo9g01884 391 MobiDBLite consensus disorder prediction 92 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01884 Pumo-Chr9 47968035 47971294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01884 K22184 - gmx:102669285 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01884 9 47968035 47971294 Pumo9g01884 9 47968035 47971294 ECH
Pumo1g00885 1 13433173 13439411 Pumo9g01884 9 47968035 47971294 PCT