Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01874 ATGAACAAATTCAACAAATCTGAACTTGTAGTGCTTTCCGTCCTTGCTCTTCTCCTTGGAACCACACCCTTGTTACCTTCCTCTCTGAGGCCAACCTACCTTTACTTCATCTTTAACGTTCTCATCATTGCACTTGGAGCTGAAGCTGGTCTTCTCTCAGTTTTTACTAAGCCTTTAGAAGACAACAAGCAACATGTTTCTGTCACCCAGAAACCTGTGATGCCCCCAGAAGTGTATGAGCCTGAGGAAAGGGTGGAAGCATTCAACATAACAGGTGGAAGTGGTGACTCAGAACATGATGAAAAGAAGCCTAAGGTTGTTGAAAAGTCTGCTTCTGATGAGAAGATTCTTGTTGGTGTCACTAAGGTAGATGAGGTGAAAAAGTGTCCTTCAATGCCAAATCTTTTGCTCATGGGAGGTGGAGAAAGTGAAGGAGAAGTCATGGACGAGGAGATTGAAGCAGAAGATGAGGTTGGGGGAGTTAATGGGCAAGAGTTGTTTGCAAAAGCTGAGGCCTTCATTGGGAACTTCTACAAACAGTTAAAGATGCAGAGAGAGGATTCTTGGGTTTATCAGGAAGCCTTTTAG 588 0.4371 MNKFNKSELVVLSVLALLLGTTPLLPSSLRPTYLYFIFNVLIIALGAEAGLLSVFTKPLEDNKQHVSVTQKPVMPPEVYEPEERVEAFNITGGSGDSEHDEKKPKVVEKSASDEKILVGVTKVDEVKKCPSMPNLLLMGGGESEGEVMDEEIEAEDEVGGVNGQELFAKAEAFIGNFYKQLKMQREDSWVYQEAF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01874 195 Pfam Cotton fibre expressed protein 164 189 IPR008480 -
Pumo9g01874 195 PANTHER OS01G0532300 PROTEIN 1 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01874 Pumo-Chr9 47875770 47876589 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01874 - - mtr:11426799 186.422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00861 1 13168896 13169441 Pumo9g01874 9 47875770 47876589 PCT