Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00861 ATGAACAGGTTTAAGAAATCTCAAGTTCTAGTGCTCTTTGTTCTAATTGTTCTTCTTCTCATCACACCCTCTTTACCTTCCTCTCTGAGACCAACCTACTTGTATTTCATCATAAACTTCCTCATCATGGCACTTTGTGCTGAAGCTGGCCTCATTTCAGTTTTTGCTACCCCTTTAGAAGATAGAAAGCAATCTGCTTCTGTTACCCCTAAACCTGTGATGCCATTAGAAGCCACTTCTGAGAAAAGAGAAGTTTCCAATTCCACCCCTACAGTTGTTGGTGATGTCTCAGAACATGTTGAAAAGTCTGCATCTGAGAGGGTTGTTTGTGTCACCAAAGTGGACAAGGTGCAAAATTCTCCTTCAATGCCTACCCTTTTCTTCATAGGGGGTGGAGAAGCTGATGAAGAAGTCATGGATGAAGAGCTTGAAGCAGAAGAGGAGATTGGAGGAGTTAATGGGCAAGAACTCTCTGCAAAAGCTGAGGCCTTCATTGGGAACTTCTACAAGCAACTGAAGATGCAAAGTGAGGAATCTTGGATTTAA 546 0.4231 MNRFKKSQVLVLFVLIVLLLITPSLPSSLRPTYLYFIINFLIMALCAEAGLISVFATPLEDRKQSASVTPKPVMPLEATSEKREVSNSTPTVVGDVSEHVEKSASERVVCVTKVDKVQNSPSMPTLFFIGGGEADEEVMDEELEAEEEIGGVNGQELSAKAEAFIGNFYKQLKMQSEESWI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00861 181 Pfam Cotton fibre expressed protein 155 180 IPR008480 -
Pumo1g00861 181 PANTHER OS01G0532300 PROTEIN 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00861 Pumo-Chr1 13168896 13169441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00861 - - gmx:100785054 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00861 1 13168896 13169441 Pumo1g00861 1 13168896 13169441 ECH
Pumo1g00861 1 13168896 13169441 Pumo9g01874 9 47875770 47876589 PCT