Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01821 ATGGAATCCCCACAATCTGTTGTTTCACCATTCAAGAGCTCTGTCTTGGGTGAAGCTGAGAAGTATAGGTCTGATGTTTTCACACAAAGCTCGGGTCCCTTGTCTAAGGACATTGAAGTCAATGGAAAGGATGCTGCTGAGTCTAATCCGGAGGAATTCATTGGTGTTGTTGATGTTTACATTCATCAGGCCAGGGACATTCATAACATCTGCATATACCACAAGCAAGATGTTTATGCTAAGATTTGCTTGACTAGTAATCCTGAGAATACTGTCTCTACCAAGACTATCAATGGAGGAGGAAGGAACCCCGTCTTTAATGAGAATCTTCGTCTGAACGTTAGGACTGTTGATTCTGCTGTCAAATGTGAAATTTGGATGCTGAGCAGGGTGAAGAATTATCTTGAAGATCAGTTGCTTGGTTTTGCTTTGGTGCCTTTGTCTGAAGTACTGGTAAAGGATGGCAAACTAGAGAAAGAGTTCTCTCTTTCTTCAACCGATTTATTCCATTCCCCAGCAGGTTTTGTTCAATTGTCTCTTGTTTACTCTGGCGCTTCGCCTGATGTTATGGCAATTTCTGCAATGCCTACTGAGTTGGCCTCAAATGGCACCGAGAAGGATTCCGAATCATGCGAGTCACTGGTCAGAGATTTGGACAAAATCGAATTCCCGGATCCAAAAATTGTAAATGAAGACCACTTGATGGTTTCGGAATACTTTGGCATTCCATGTGAGGAGAGCCAGTGTTCTGATAGCTTGACCACTACTGATACTGAAAATCTTAGTTCTGAAGCAGGTGTTCAGCTTGTGGAGAGCTTCTCAGCATGCAGTGTTGAATCTGTCCAACCTCCTAAGGCTGATTCTCCACCCAGCAGTGTGTCAACAAATGGGATTTCATCTCCTTCAGTGGCTGCAAGCTCAGACTCATCTGATGTTGCTGCTTCCAAGTCTCCCAATCAGGAACAAGTTTCAGCCACCAAAGAGAAAAATGGGGATGCCAAAGATGGTGAGAGTGATTCCTCAAATGGGGTGCTGAATGAGTCATTCCCTAAGCCTGTTGTGACTGTTAACATTGAGCCGGAGCCAAATGTGGTGCAGCAGGATTTTGTAGACATGTACATGAAAAGCATGCAGCAATTCACAGAGTCATTGGCGAAAATGAAGCTTCCTATGGACTTTGAAAGTGGACCAACTAGTTCAGGAAACTCAAGCTCTGAAAAGAAGATACAGACACCAAAGAGCACTAACTCACGTGTGTTTTATGGTAGCAGGGCTTTCTTCTGA 1284 0.4377 MESPQSVVSPFKSSVLGEAEKYRSDVFTQSSGPLSKDIEVNGKDAAESNPEEFIGVVDVYIHQARDIHNICIYHKQDVYAKICLTSNPENTVSTKTINGGGRNPVFNENLRLNVRTVDSAVKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVKDGKLEKEFSLSSTDLFHSPAGFVQLSLVYSGASPDVMAISAMPTELASNGTEKDSESCESLVRDLDKIEFPDPKIVNEDHLMVSEYFGIPCEESQCSDSLTTTDTENLSSEAGVQLVESFSACSVESVQPPKADSPPSSVSTNGISSPSVAASSDSSDVAASKSPNQEQVSATKEKNGDAKDGESDSSNGVLNESFPKPVVTVNIEPEPNVVQQDFVDMYMKSMQQFTESLAKMKLPMDFESGPTSSGNSSSEKKIQTPKSTNSRVFYGSRAFF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01821 427 SMART C2_3c 56 159 IPR000008 -
Pumo9g01821 427 MobiDBLite consensus disorder prediction 395 416 - -
Pumo9g01821 427 ProSiteProfiles C2 domain profile. 30 161 IPR000008 -
Pumo9g01821 427 MobiDBLite consensus disorder prediction 280 348 - -
Pumo9g01821 427 MobiDBLite consensus disorder prediction 280 326 - -
Pumo9g01821 427 MobiDBLite consensus disorder prediction 391 416 - -
Pumo9g01821 427 Pfam C2 domain 56 161 IPR000008 -
Pumo9g01821 427 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 50 183 IPR035892 -
Pumo9g01821 427 CDD C2 57 163 - -
Pumo9g01821 427 Gene3D C2 domain 51 207 IPR035892 -
Pumo9g01821 427 PANTHER EXPRESSED PROTEIN 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01821 Pumo-Chr9 47328528 47331756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01821 - - gmx:100781587 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01821 9 47328528 47331756 Pumo9g01821 9 47328528 47331756 ECH
Pumo1g00835 1 12681196 12683898 Pumo9g01821 9 47328528 47331756 PCT