Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00835 ATGGATTCCCCACAATCTGTTGTGTCACCCTTCAGGAGCTCAGTGTTCGGTGAGGGTGAGAAGCACAAATCTGATGTTTTCTCAGGAAACTCTAGTCCTTTGTCCAAGGACATTGAAGTGAATGGGAAGGAAGTTGTCATGTCAAATGTAGAGGAGTTTCTTGGAGTGCTTGATGTTTACATACATCAGGCCAGGGATATTCAAAACATTTGCATATACCACAAGCAAGATGTTTATGCTAAGATTTCCCTGACCAGTAATCCTGAGACCACTGTGTCTACCAAAACCATCAATGGAGGTGGAAGGAACCCTGTGTTCAATGAGAATCTTAGTATCGATGTTAGGACTGTTGATGCATCTCTCAAGTGTGAGATATGGATGCTTAGCAGGGTGAAGAACTATCTTGAAGACCAGTTGCTTGGTTTTGCTTTGGTACCCTTGTCTGAAGTACTAGTCCAGAATGGGAAACTTGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTATTCCATTCTCCTTCAGGTTTTGTTCAGTTGTCGCTTTCTTACACTGGTGCTTCACCTGATGTTATGGCAATTTCTGCAATGCCAAACAAGGTGGCCACAGATGCCGCCGGGCAGGACTCGGAAACGTCTGAGTCACTGGCCCAGGATTTAGACAAAATTGAGTTCCCGGATCCGAAGATTGTGAATGAAGACCACTTGATGGTTTCAGAATACTTCGGCATTCCGTGTGAGGAGACTCAGTGTTCTGATAGCTTGGCTACTTCTGATGCTGAAAATCACAGTTCCGAAGCCGGTGTTCGGCTTGTGGAAAGCTTCTCAGCATGCAGTGTTGAGTCTGTTCAGCCAACTAAGGTTGATTCCCCTCCTAGCAGTGTGTCAACAAATGGGGTTTCTTCCCCTTCAGTGCCTGCAAGCTCAGAATCATCTGAGGCTGCTGCTTCTAAGTCTCCCATTCAGGAGCAAGTTTCAGGCACCAAAGAGGACAAAAATGTGGATGCCAAAGATGGTGAGAGTGATTCCTCAAGTGGGGTTCCTAGTGACTCATTCCCTAAGCCTGTTGTGAGTGTGAACATTGAGCCTGAGCCAAAGGTGGTGCAGCAGGATATAGTAGACATGTACATGAAAAGCATGCAGCAATTCACTGAGTCACTAGCAAAAATGAAGCTCCCTATGGACTTAGAAAGTGAACCAACTAGTTCAGGAAATTCAACCACTGAGCAGAAACTACAGCCATCAAAGAGCAATAATTCCCGCGTGTTTTATGGCAGCAGAGCTTTCTTCTGA 1287 0.4522 MDSPQSVVSPFRSSVFGEGEKHKSDVFSGNSSPLSKDIEVNGKEVVMSNVEEFLGVLDVYIHQARDIQNICIYHKQDVYAKISLTSNPETTVSTKTINGGGRNPVFNENLSIDVRTVDASLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVQNGKLEKEFSLSSTDLFHSPSGFVQLSLSYTGASPDVMAISAMPNKVATDAAGQDSETSESLAQDLDKIEFPDPKIVNEDHLMVSEYFGIPCEETQCSDSLATSDAENHSSEAGVRLVESFSACSVESVQPTKVDSPPSSVSTNGVSSPSVPASSESSEAAASKSPIQEQVSGTKEDKNVDAKDGESDSSSGVPSDSFPKPVVSVNIEPEPKVVQQDIVDMYMKSMQQFTESLAKMKLPMDLESEPTSSGNSTTEQKLQPSKSNNSRVFYGSRAFF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00835 428 SMART C2_3c 56 159 IPR000008 -
Pumo1g00835 428 MobiDBLite consensus disorder prediction 281 325 - -
Pumo1g00835 428 Gene3D C2 domain 51 212 IPR035892 -
Pumo1g00835 428 PANTHER EXPRESSED PROTEIN 1 428 - -
Pumo1g00835 428 MobiDBLite consensus disorder prediction 390 428 - -
Pumo1g00835 428 MobiDBLite consensus disorder prediction 281 356 - -
Pumo1g00835 428 CDD C2 57 163 - -
Pumo1g00835 428 MobiDBLite consensus disorder prediction 396 422 - -
Pumo1g00835 428 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 185 IPR035892 -
Pumo1g00835 428 ProSiteProfiles C2 domain profile. 30 161 IPR000008 -
Pumo1g00835 428 Pfam C2 domain 55 162 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00835 Pumo-Chr1 12681196 12683898 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00835 - - gmx:100804602 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00835 1 12681196 12683898 Pumo1g00835 1 12681196 12683898 ECH
Pumo1g00835 1 12681196 12683898 Pumo9g01821 9 47328528 47331756 PCT