Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01803 ATGATGAAAAGGCACTCCCTTGTGACTGCATCACCAAATCAATTGTCCCTCCTCTTTGTTGGCCACAACAGCAACCCAACAATTTATCCTCACACTCACACCCTTGTGACTCCACCACCAAAACAAGTCTTCCAAACTCATAATCCTTGGTGGGGCTACCCCAAAACCTTCAAACCTAGTTTCATTCCCTATTTACCCCCTTTCAATCACAGGGTCAACACCTTGCACACTGGCTCCACTGTAGAACAAGTTGAAGTAGTGGATGAGGTTGAACTCGATATGTGGATGAAGATGCAGGAAGAAGCCAGACTCGATGTCACTGTGGAACCCATTTTGTCTAGCTACTACAACACTTCCATTCTCTCTCACAAATCACTGCAAACCGCGTTGGCCAATCACCTTGCCATCAGACTCAGTAATTCGAGCCTTCCTAGCAGCACCCTTTCTGATCTTTTTGTCACTGTTCTGGAAACTGATCTGGCCATCATGGATGCTGTGAAGAGTGACCTGAGAGCAGTGAAGGAGAGAGACCCTGCTTGCATAAGCCACGCGCACTGCTTCTTGAATTTCAAGGGCTTTCTGGCATGCCAGGCTCATAGGGTGGCTCACAAATTGTGGCTCCAGGGAAGGAAGATTCTAGCTGTCATGATTCAGAACCGGGTCTCTGAGGTTTTTGCTGTGGATATTCATCCGGGGGCTAAGATTGGAAGTGGAATTTTGCTGGATCATGCAACTGGGATTGTGGTGGGAGAGACGGCTGTGATAGGGAACAATGTGTCAATTCTGCATAGTGTGACTTTGGGAGGGACTGGTAAGGTTTCTGGGGATAGGCACCCCAAGATTGGTGATGGGGTGCTGATAGGTGCAGGAACTTGTATCTTGGGGAATATTAAGGTTGGTGATGGGGCTAAGATTGGTGCTGGTTCTGTGGTTATCAAGGATGTGCCTCCAAGGACTACTGTTGTTGGGAACCCGGCTAAGTTGGTAGGAGGGAAGAACAACCCTGTTAAGTTGGATAAGATTCCTAGCTTCACCATGGACCATACTTCACATATTGCTGACTTTTATGATTATTGTGTTTAG 1083 0.4728 MMKRHSLVTASPNQLSLLFVGHNSNPTIYPHTHTLVTPPPKQVFQTHNPWWGYPKTFKPSFIPYLPPFNHRVNTLHTGSTVEQVEVVDEVELDMWMKMQEEARLDVTVEPILSSYYNTSILSHKSLQTALANHLAIRLSNSSLPSSTLSDLFVTVLETDLAIMDAVKSDLRAVKERDPACISHAHCFLNFKGFLACQAHRVAHKLWLQGRKILAVMIQNRVSEVFAVDIHPGAKIGSGILLDHATGIVVGETAVIGNNVSILHSVTLGGTGKVSGDRHPKIGDGVLIGAGTCILGNIKVGDGAKIGAGSVVIKDVPPRTTVVGNPAKLVGGKNNPVKLDKIPSFTMDHTSHIADFYDYCV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01803 360 Gene3D Hexapeptide repeat proteins 228 348 - -
Pumo9g01803 360 FunFam serine acetyltransferase 1, chloroplastic 78 227 - -
Pumo9g01803 360 PANTHER SERINE ACETYLTRANSFERASE 86 359 - -
Pumo9g01803 360 Pfam Serine acetyltransferase, N-terminal 94 198 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pumo9g01803 360 Gene3D serine acetyltransferase, domain 1 77 227 IPR042122 -
Pumo9g01803 360 NCBIfam serine O-acetyltransferase 166 327 IPR005881 GO:0005737|GO:0006535|GO:0009001
Pumo9g01803 360 CDD LbH_SAT 225 325 IPR045304 -
Pumo9g01803 360 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 287 315 IPR018357 GO:0016740
Pumo9g01803 360 Pfam Bacterial transferase hexapeptide (six repeats) 278 312 IPR001451 -
Pumo9g01803 360 FunFam Serine acetyltransferase 228 354 - -
Pumo9g01803 360 SUPERFAMILY Trimeric LpxA-like enzymes 101 330 IPR011004 -
Pumo9g01803 360 SMART SATase_N_2_a 94 198 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01803 Pumo-Chr9 47162862 47164637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01803 94 356 Miscellaneous Gene Families AT2G17640 53.532 1.95e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01803 K00640 - gmx:100820316 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01803 9 47162862 47164637 Pumo9g01803 9 47162862 47164637 ECH
Pumo1g00816 1 12388949 12390807 Pumo9g01803 9 47162862 47164637 PCT