Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01386 ATGGCATCCTCTGTTGCTTTAGTTTTGGGTCTATGTCTAGCAATCAACATGGCCCTGCTGACACAGGCAACTACCCACACAGTAGGAGACACCTCAGGTTGGGCAATTGGTGCTGATTACAGCACATGGGCTAGTGGCTTGAAATTTAAAGTCGGTGATACTCTTGTTTTCAATTATGGGGCTGGTCACACGGTGGACGAAGTAAAAGAAAGCGATTACAAGAGCTGCACCACGGGCAATTCGCTGAGCACAGACAGCAGTGGCACCACCACAATTACCCTTAAGACCGCCGGCACTCATTACTTCATATGTGCTGCTCCTAGCCACTGCGACGGTGGCATGAAGCTTGCTGTTAAGGTAAAGGCTAAAAAAGCCGCTGCTCCGGCCGCGGCACCATCACCGGCAAAGGACTCACCTTCTTCTGAATCTGATGACACCAAAGACACACCCACTAGTACTACTCCCACCACCCCTAAAACTTCATCCTCCACCACCCCTTCAACTCCAACCTCCACCACTACTACCACATCTTCTGCAACTGGTGGCTCACCAATTGTTGCTGTGTTTATTGTTTCTTGGATCTCACACTTGGTGTTGCGTTTGGTGTGA 609 0.4992 MASSVALVLGLCLAINMALLTQATTHTVGDTSGWAIGADYSTWASGLKFKVGDTLVFNYGAGHTVDEVKESDYKSCTTGNSLSTDSSGTTTITLKTAGTHYFICAAPSHCDGGMKLAVKVKAKKAAAPAAAPSPAKDSPSSESDDTKDTPTSTTPTTPKTSSSTTPSTPTSTTTTTSSATGGSPIVAVFIVSWISHLVLRLV 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01386 202 CDD Phytocyanin 24 116 - -
Pumo9g01386 202 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Pumo9g01386 202 Gene3D - 22 127 IPR008972 -
Pumo9g01386 202 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Pumo9g01386 202 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Pumo9g01386 202 PANTHER BLUE COPPER PROTEIN 23 137 IPR039391 GO:0009055
Pumo9g01386 202 MobiDBLite consensus disorder prediction 145 180 - -
Pumo9g01386 202 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Pumo9g01386 202 MobiDBLite consensus disorder prediction 127 180 - -
Pumo9g01386 202 FunFam Blue copper 22 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01386 Pumo-Chr9 40861414 40862738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01386 12 123 Miscellaneous Gene Families AT1G22480 56.250 3.41e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01386 - - gmx:100305666 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01386 9 40861414 40862738 Pumo9g01386 9 40861414 40862738 ECH
Pumo9g01386 9 40861414 40862738 Pumo10g01110 10 14302026 14303011 PCT