Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01110 ATGCGACAAACTGGGCCTAACTCTCAACAACTCACACCCCATTCTTTCAATAATAGTATAAAGCAAACACATCCTCCACTTGCATCTTCAGAGCCTCCTCTGTTTTCCTTGTTTCCCCTATTATCTCACCAAATCATGGCATTCTCAAGTGCTTTGGTTTTGGGCTCCTTGCTAGCGATCAACATGGCCCTGCCAACCCTGGCAACCGTCTACACCGTGGGAGATACTTCAGGTTGGGCAATTGGTGCTGATTATAGCACATGGACTGGTGACAAGACCTTTACAGTGGGTGATAGTCTCGCGTTCAATTATGGAGCCTGGGCACACAGTGGATGA 336 0.4762 MRQTGPNSQQLTPHSFNNSIKQTHPPLASSEPPLFSLFPLLSHQIMAFSSALVLGSLLAINMALPTLATVYTVGDTSGWAIGADYSTWTGDKTFTVGDSLAFNYGAWAHSG 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01110 111 MobiDBLite consensus disorder prediction 1 29 - -
Pumo10g01110 111 MobiDBLite consensus disorder prediction 1 26 - -
Pumo10g01110 111 Pfam Plastocyanin-like domain 79 110 IPR003245 GO:0009055
Pumo10g01110 111 Gene3D - 66 110 IPR008972 -
Pumo10g01110 111 SUPERFAMILY Cupredoxins 68 110 IPR008972 -
Pumo10g01110 111 ProSiteProfiles Phytocyanin domain profile. 69 111 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01110 Pumo-Chr10 14302026 14303011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01110 34 109 Miscellaneous Gene Families AT2G32300 41.772 1.85e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01110 - - gmx:100306522 116.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01110 10 14302026 14303011 Pumo10g01110 10 14302026 14303011 ECH
Pumo9g01386 9 40861414 40862738 Pumo10g01110 10 14302026 14303011 PCT