Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01383 ATGCAGAAACGCAAGTTGATTCCGTTGGCGCTGCTGAGAAAGTTGCTCATTGCAGCCATATGCTCCATAGCGTTTGTGGCTCTCTTCTCTGTGCGCGTTCACATTGTCCCTTCCTCTAAAGATCACAGGTTCAACGACAAGATCTCCACGCCTCAGGATCCGCAAAGCTGGACGCGAGAGCTCGCCCCACCTCATTTATCCAAATCTCCACTTCCTACTCCCAAGTTGAGTGGTTCAAGACGGTACTTAGATTTCCAGAAGTTGTGGAAGCCTCCATCAAATCGTGGGTTTTTGCCCTGTACAGAGCCTACACCTAATTACACCACTCCTGCCGAGTCGCGAGGGTATCTTTTAGTTCATACAAATGGTGGGCTCAACCAAATGCGTTCTGGGATATGTGATATGGTAGCAGTAGCTCGTATCATAAATGCCACTCTTGTAATTCCAGAACTGGATAAAAGATCATTTTGGCAAGATACTAGCAATTTCTCTGATATTTTTGATGAAGAGCATTTTATGAATTCACTAGCTAATGATGTAAAAATCATTAAGAAGCTTCCCAAAGACCTGGTTAATGCAACCAAAGTGGTCAAGCAATTCATAAGCTGGTCTGGTATGGATTACTATGAGAATGAGATTGCTAGCTTGTGGGAAGATTACCAAGTTATTCGAGCTTCCAAATCTGATTCGCGATTAGCAAACAACAATCTACCTCCAGACATTCAGAAGCTTCGCTGCCGAGCTTGTTATGAAGCTCTTCGCTTCTCTCCTCGCATTGAACAAATGGGAAAGTTGTTGGTGGAGAGGATGAGGTCATTTGGTCCTTACATTGCATTGCATTTGCGTTACGAGAAGGATATGCTTGCATTTAGTGGGTGCACCCATGATTTATCTCCTGTTGAAGCTGAAGAGCTACAGATGATCAGAGAGAACATTTCCTATTGGAAAATAAAGGAGATTGATCCAATAGAACAGAGGTCCAAAGGGCTTTGCCCCTTAACTCCAAAGGAAGTTGGGATTTTTCTTACTGCTCTTGGATACCCATCAAGAACTCCAATATATATTGCTGCCGGAGAGATATACGGGGGCGAGTCCCATATGGCTGAACTGCGTTCCCGTTATCCATTGTTGATGAGCAAGGAAAAGTTGGCATCCATAGAAGAGCTTGAACCCTTTTCTAATCATGCATCCCAAATGGCTGCTCTCGACTATATTGTATCTATTGAAAGTGATGTATTTATACCTTCTTATTCCGGAAACATGGCAAAGGCTGTTGAGGGTCATCGACGTTTTCTTGGACGTGGAAGAACAATATCTCCCGACAAGAAAGCCCTTGTTCGACTGTTCGATAAACTGGATCAGGGAATACTGACTGAGGGGAAGAAACTATCAAATAAGATTATTGATCTCCACAGAAGACGACTTGGATCTCCCAGGAAAAGAAAAGGGCCAATTTCTGGAACAAAGGGCATGGACAGGTTTCGGTCAGAAGAAACCTTTTATGCTAATCCCTTGCCTGATTGTTTATGCCGGACAGAACCACCACCTCTAAACATCTCTCGCATTGTTTGA 1572 0.437 MQKRKLIPLALLRKLLIAAICSIAFVALFSVRVHIVPSSKDHRFNDKISTPQDPQSWTRELAPPHLSKSPLPTPKLSGSRRYLDFQKLWKPPSNRGFLPCTEPTPNYTTPAESRGYLLVHTNGGLNQMRSGICDMVAVARIINATLVIPELDKRSFWQDTSNFSDIFDEEHFMNSLANDVKIIKKLPKDLVNATKVVKQFISWSGMDYYENEIASLWEDYQVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEQMGKLLVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSPVEAEELQMIRENISYWKIKEIDPIEQRSKGLCPLTPKEVGIFLTALGYPSRTPIYIAAGEIYGGESHMAELRSRYPLLMSKEKLASIEELEPFSNHASQMAALDYIVSIESDVFIPSYSGNMAKAVEGHRRFLGRGRTISPDKKALVRLFDKLDQGILTEGKKLSNKIIDLHRRRLGSPRKRKGPISGTKGMDRFRSEETFYANPLPDCLCRTEPPPLNISRIV 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01383 523 PIRSF UCP009360 1 514 IPR024709 -
Pumo9g01383 523 PANTHER OS02G0726500 PROTEIN-RELATED 14 511 - -
Pumo9g01383 523 MobiDBLite consensus disorder prediction 42 74 - -
Pumo9g01383 523 FunFam O-fucosyltransferase 28 247 441 - -
Pumo9g01383 523 Pfam GDP-fucose protein O-fucosyltransferase 116 431 IPR019378 -
Pumo9g01383 523 CDD O-FucT_plant 116 437 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01383 Pumo-Chr9 40806006 40812082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01383 60 514 Miscellaneous Gene Families AT1G22460 70.330 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01383 - - gmx:100795727 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01383 9 40806006 40812082 Pumo9g01383 9 40806006 40812082 ECH
Pumo9g01383 9 40806006 40812082 Pumo10g01119 10 14378265 14383505 PCT