Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01119 ATGCAGAGGCGTAAGACGGTTCCATTGGGCATGCTCAGAAGGTTTCTCGCGGCATCAATATTCTCAATAGTTGTCACTTCTTTCTTCTTTGTTCACGTTCACGTTTCTCCTTCGCCCACTGATCACAAGTTCAATGATAAGATCCCCTCGTTTCGTGACCCGCAAAGCTGGACTCGAGAACTGGCTCCGCCTCATCTATCCAAGGCTCCACTCTCTGTTCCCAAGTTGAAGGATTCAAGAAAGGATTCAGACTACGAAAAACTGTGGAAGCCTCCACCAAATCATGGGTTTATACCCTGTACAAAGCCTACTCCTAATTACTCAACTCCTGGAAGGTCACGTGGTTACCTTTCAGTTCATACAAATGGAGGGCTAAACCAGATGCGTACTGGGATATGTGATATGGTAGCTATAGCTCGTATCATAAATGCCACTCTTGTAATTCCAGAACTTGATAAAAAGTCATTTTGGCATGACACTAGCAATTTCTCTGATATCTTTGATGAAGAGTGGTTTATTAGTTCTCTAGCTAATGATATAAAAATCATTAAGAAGCTTCCCAAAAAACTGGTTAATGCAACCAAAATCGTCATGCAATTCAGAAGCTGGTCTGGTATGGATTACTATGAGAATGAGATTGCTGCCTTGTGGGATAAATTCAAAGTAATTCGAGCTTCCAAATCTGATTCTCGGTTAGCAAATAACAACCTACCTCCAGATATTCAGAAGCTTCGCTGCCGTGCTTGTTATGAAGCTCTTCGTTTCTCTCCTCACATTGAAAAAATGGGAAAAATATTGGTGGAGAGGATGAGGTCATTTGGCCCTTATATTGCATTGCATTTACGTTATGAGAAGGATATGCTTGCATTTAGTGGGTGCACGCATGAATTATCTACATCTGAGGCTCAAGAGCTACGGATTATCAGAGAGAATACTACTTATTGGAAAAGAAAGTACATTAATCCCATAGAAGAGAGGTCCAAAGGGTTTTGCCCCTTAACTCCAAAGGAAGTTGGAATTTTTCTTACTGCTCTTGGATACCCATCAAAGGCTCCAATATATATTGCTGCTGGGGAGATATATGGGGGTGAGTCCCATATGACTGACCTGCAATCCCGCTATCCATTGTTAATGAGCAAGGAAAAGTTGGCATCCATTGAGGAGCTTGAACCCTTTTCTAGTCATGCGTCTCAAATGGCTGCTCTTGACTATATTGTATCAGTTGAAAGTGATGTATTTGTACATTCTTACCCTGGAAACATGGCAAAGACTGTTGAAGGCCATCGTCGTTTTCTTGGGAATGGAAGAACAATATCTCCTGATAGGAAAGCGCTTGTTCGTCTGTTTGATAAACTGGCAAATGGATCAATGACTGAGGGGAAAACACTGTCTAATAAAATCATTGATCTCCACAAAAAACGGCTTGGCTTCTTCAGAAAGAGAAAAGGACCCGTTTCTGGAACAAAGGGCTTGGACAGGTTTCGCTCAGAAGAAACATTTTATGCAAACCCTTTACCTGGTTGTTTATGTCGGACAGAATCACTCTCTATAAACGCTTCTTCTCACTTCTCAGTATAG 1578 0.4157 MQRRKTVPLGMLRRFLAASIFSIVVTSFFFVHVHVSPSPTDHKFNDKIPSFRDPQSWTRELAPPHLSKAPLSVPKLKDSRKDSDYEKLWKPPPNHGFIPCTKPTPNYSTPGRSRGYLSVHTNGGLNQMRTGICDMVAIARIINATLVIPELDKKSFWHDTSNFSDIFDEEWFISSLANDIKIIKKLPKKLVNATKIVMQFRSWSGMDYYENEIAALWDKFKVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPHIEKMGKILVERMRSFGPYIALHLRYEKDMLAFSGCTHELSTSEAQELRIIRENTTYWKRKYINPIEERSKGFCPLTPKEVGIFLTALGYPSKAPIYIAAGEIYGGESHMTDLQSRYPLLMSKEKLASIEELEPFSSHASQMAALDYIVSVESDVFVHSYPGNMAKTVEGHRRFLGNGRTISPDRKALVRLFDKLANGSMTEGKTLSNKIIDLHKKRLGFFRKRKGPVSGTKGLDRFRSEETFYANPLPGCLCRTESLSINASSHFSV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01119 525 FunFam O-fucosyltransferase 28 247 441 - -
Pumo10g01119 525 PIRSF UCP009360 1 513 IPR024709 -
Pumo10g01119 525 PANTHER OS02G0726500 PROTEIN-RELATED 14 511 - -
Pumo10g01119 525 CDD O-FucT_plant 116 437 IPR024709 -
Pumo10g01119 525 Pfam GDP-fucose protein O-fucosyltransferase 116 431 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01119 Pumo-Chr10 14378265 14383505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01119 60 513 Miscellaneous Gene Families AT1G22460 66.740 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01119 - - gmx:100807411 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01119 10 14378265 14383505 Pumo10g01119 10 14378265 14383505 ECH
Pumo9g01383 9 40806006 40812082 Pumo10g01119 10 14378265 14383505 PCT