Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01328 ATGTCGTTGTCGATCGCTTTGGGAGTCACGAATCGTGGTAACGTGGCGGGGAAGCATCCTGTGTTGCTGTTTTTGAAGCAGGGAAAGGTGAGAAACGGGAATCCGGTGAAACAGTTGGTGGGGTTTCAAAGTGTGAAGCTGAATGCTGGGGAAACGGCACAAGTGGGATTTGAGCTAAGCCCTTGTGAGCATCTTAGCATAGCAAATGAGGCTGGTTCAATGGTGATTGAAGAAGGGTCCTATTTGTTGCTTGTGGGGGACCAAGAGTACCCAATTGAAATCACAGTTTGA 291 0.4845 MSLSIALGVTNRGNVAGKHPVLLFLKQGKVRNGNPVKQLVGFQSVKLNAGETAQVGFELSPCEHLSIANEAGSMVIEEGSYLLLVGDQEYPIEITV 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01328 96 PANTHER SUGAR HYDROLASE-RELATED 3 92 IPR044993 GO:0009044|GO:0045493
Pumo9g01328 96 SMART Fn3_like_2 19 89 IPR026891 -
Pumo9g01328 96 Gene3D Immunoglobulins 1 95 IPR013783 -
Pumo9g01328 96 Pfam Fibronectin type III-like domain 21 88 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01328 Pumo-Chr9 38904642 38904932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01328 5 96 Glycoside Hydrolase AT1G78060 50.000 2.49e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01328 - - gmx:100780688 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01328 9 38904642 38904932 Pumo9g01328 9 38904642 38904932 ECH
Pumo9g01328 9 38904642 38904932 Pumo10g01159 10 14998327 15003772 PCT