Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01325 ATGAGTGTGGATCCAAAGAAAAGTGCCTCTAATGGCCAGGAGAAAATGTTACCATCACAGGAACAGCAGGCATTGATCAATGAGGTGAGAAGGTTAATTGGGCCACAGTCTGGTCAGGCATCCATTTTTTGTTCTGATGCATGCATCTCAAGGTATTTGAGGGCCCGAAATTGGAATGTCAAGAAGGCAACCAAAATGTTGAAGCTGACCCTGAAATGGAGAGAAGAATACAAACCAGAAGAGATTCGCTGGGAAGATGTTGCTCATGAAGCAGAGACAGGAAAAATCTATAGATCAAATTACATTGACAAGCATGGGAGAACTGTCCTAGTAATGAGACCTAGTCACCAGAACTCAAAGTCAACAAAAGGCCAAATTAAATATTTGGTATACTGCATGGAGAATGCTATTTTAAATCTTCCACCAGAACAGGAACAAATGGTCTGGTTGATTGACTTCCAGGGTTTCAATATGTCACATATATCAATAAAGGTGACACGTGAAACGGCCCATGTATTACAAGAACATTATCCTGAACGGCTGGGTCTGGCAATACTGTACAATGCACCTAAGTTCTTCGAACCATTTTTCATGATGGTAAAGCCCTTATTAGAGCCTAAGACTTATAATAAAGTCAAGTTCGGTTACTCTGATGATCAGAACACCAAGAAGATTATGGAGGATTTGTTTGATTTTGACCATCTTGAATCTGCATTTGGCGGGAAAGATGATACAGGATTTGACATAAATAGATATGCTGAGAGAATGAAAGAGGATGACAAGAAGATTCCCTCTTTCTGGACAAGGGAAAACTCTCCACCATCAGTCCCAAATCATGCTCCTTCTTTAGATTCGACTAGGTTAGAATCAGATACTGATGCTTCAGACAATGAGAAAATAGACTCTTCCGCTGACCCCGTGATGGATACAGGTATCATTAGCCCTGATCAGAATTCCTTGGTTAATGAAGGAGAAAGAAATGCCAACACAGATAAGCATTAG 1002 0.4052 MSVDPKKSASNGQEKMLPSQEQQALINEVRRLIGPQSGQASIFCSDACISRYLRARNWNVKKATKMLKLTLKWREEYKPEEIRWEDVAHEAETGKIYRSNYIDKHGRTVLVMRPSHQNSKSTKGQIKYLVYCMENAILNLPPEQEQMVWLIDFQGFNMSHISIKVTRETAHVLQEHYPERLGLAILYNAPKFFEPFFMMVKPLLEPKTYNKVKFGYSDDQNTKKIMEDLFDFDHLESAFGGKDDTGFDINRYAERMKEDDKKIPSFWTRENSPPSVPNHAPSLDSTRLESDTDASDNEKIDSSADPVMDTGIISPDQNSLVNEGERNANTDKH 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01325 333 SUPERFAMILY CRAL/TRIO N-terminal domain 19 86 IPR036273 -
Pumo9g01325 333 MobiDBLite consensus disorder prediction 268 288 - -
Pumo9g01325 333 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Pumo9g01325 333 PANTHER GH16843P 5 277 - -
Pumo9g01325 333 FunFam Phosphatidylinositol transfer protein 3 5 275 - -
Pumo9g01325 333 MobiDBLite consensus disorder prediction 289 303 - -
Pumo9g01325 333 MobiDBLite consensus disorder prediction 1 21 - -
Pumo9g01325 333 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Pumo9g01325 333 CDD SEC14 92 242 IPR001251 -
Pumo9g01325 333 MobiDBLite consensus disorder prediction 263 333 - -
Pumo9g01325 333 Pfam CRAL/TRIO, N-terminal domain 45 68 IPR011074 -
Pumo9g01325 333 SMART sec14_4 90 244 IPR001251 -
Pumo9g01325 333 Pfam CRAL/TRIO domain 93 241 IPR001251 -
Pumo9g01325 333 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Pumo9g01325 333 Gene3D - 2 271 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01325 Pumo-Chr9 38862723 38866456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01325 K26544 - gmx:100780151 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01325 9 38862723 38866456 Pumo9g01325 9 38862723 38866456 ECH
Pumo9g01325 9 38862723 38866456 Pumo10g01160 10 15029580 15033381 PCT